Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Notch3Q61982 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Notch3Q61982 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Notch3Q61982 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Notch3Q61982 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Notch3Q61982 Gm12922-201ENSMUST00000120626 809 ntBASIC16.31■□□□□ 0.2
Notch3Q61982 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC16.31■□□□□ 0.2
Notch3Q61982 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Notch3Q61982 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Notch3Q61982 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Notch3Q61982 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Notch3Q61982 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Notch3Q61982 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Notch3Q61982 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Notch3Q61982 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC16.3■□□□□ 0.2
Notch3Q61982 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC16.3■□□□□ 0.2
Notch3Q61982 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Notch3Q61982 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Notch3Q61982 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Notch3Q61982 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Notch3Q61982 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Notch3Q61982 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Notch3Q61982 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Notch3Q61982 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Notch3Q61982 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Notch3Q61982 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Notch3Q61982 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Notch3Q61982 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Notch3Q61982 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Notch3Q61982 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Notch3Q61982 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC16.28■□□□□ 0.2
Notch3Q61982 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Notch3Q61982 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Notch3Q61982 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Notch3Q61982 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Notch3Q61982 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Notch3Q61982 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Notch3Q61982 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Notch3Q61982 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Notch3Q61982 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Notch3Q61982 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC16.27■□□□□ 0.2
Notch3Q61982 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC16.27■□□□□ 0.2
Notch3Q61982 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Notch3Q61982 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Notch3Q61982 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Notch3Q61982 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC16.27■□□□□ 0.19
Notch3Q61982 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC16.27■□□□□ 0.19
Notch3Q61982 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC16.27■□□□□ 0.19
Notch3Q61982 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Notch3Q61982 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Notch3Q61982 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Notch3Q61982 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC16.26■□□□□ 0.19
Notch3Q61982 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Notch3Q61982 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Notch3Q61982 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Notch3Q61982 Gm28536-201ENSMUST00000190971 1317 ntBASIC16.25■□□□□ 0.19
Notch3Q61982 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Notch3Q61982 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Notch3Q61982 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Notch3Q61982 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Notch3Q61982 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Notch3Q61982 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Notch3Q61982 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
Notch3Q61982 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Notch3Q61982 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC16.24■□□□□ 0.19
Notch3Q61982 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Notch3Q61982 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Notch3Q61982 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Notch3Q61982 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Notch3Q61982 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Notch3Q61982 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Notch3Q61982 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC16.24■□□□□ 0.19
Notch3Q61982 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Notch3Q61982 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Notch3Q61982 Appbp2os-202ENSMUST00000206972 447 ntBASIC16.24■□□□□ 0.19
Notch3Q61982 AC153524.1-201ENSMUST00000220436 1935 ntBASIC16.24■□□□□ 0.19
Notch3Q61982 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Notch3Q61982 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Notch3Q61982 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Notch3Q61982 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Notch3Q61982 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC16.23■□□□□ 0.19
Notch3Q61982 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC16.23■□□□□ 0.19
Notch3Q61982 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Notch3Q61982 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC16.23■□□□□ 0.19
Notch3Q61982 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Notch3Q61982 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Notch3Q61982 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Notch3Q61982 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Notch3Q61982 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Notch3Q61982 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Notch3Q61982 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Notch3Q61982 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Notch3Q61982 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
Notch3Q61982 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Notch3Q61982 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Notch3Q61982 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Notch3Q61982 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC16.22■□□□□ 0.19
Notch3Q61982 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Notch3Q61982 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Notch3Q61982 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms