Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rai1Q61818 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21.18■□□□□ 0.98
Rai1Q61818 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Rai1Q61818 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rai1Q61818 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rai1Q61818 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.17■□□□□ 0.98
Rai1Q61818 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rai1Q61818 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Rai1Q61818 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Rai1Q61818 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rai1Q61818 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rai1Q61818 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rai1Q61818 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC21.17■□□□□ 0.98
Rai1Q61818 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Rai1Q61818 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Rai1Q61818 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC21.16■□□□□ 0.98
Rai1Q61818 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rai1Q61818 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rai1Q61818 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rai1Q61818 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rai1Q61818 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Rai1Q61818 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC21.14■□□□□ 0.98
Rai1Q61818 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Rai1Q61818 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Rai1Q61818 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rai1Q61818 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rai1Q61818 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Rai1Q61818 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rai1Q61818 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.13■□□□□ 0.97
Rai1Q61818 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rai1Q61818 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Rai1Q61818 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC21.13■□□□□ 0.97
Rai1Q61818 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Rai1Q61818 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC21.13■□□□□ 0.97
Rai1Q61818 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rai1Q61818 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rai1Q61818 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Rai1Q61818 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Rai1Q61818 Gm27454-201ENSMUST00000185090 204 ntBASIC21.11■□□□□ 0.97
Rai1Q61818 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Rai1Q61818 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rai1Q61818 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Rai1Q61818 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.11■□□□□ 0.97
Rai1Q61818 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Rai1Q61818 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Rai1Q61818 Appbp2os-202ENSMUST00000206972 447 ntBASIC21.11■□□□□ 0.97
Rai1Q61818 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rai1Q61818 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rai1Q61818 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rai1Q61818 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rai1Q61818 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC21.1■□□□□ 0.97
Rai1Q61818 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rai1Q61818 AC140930.3-201ENSMUST00000222935 274 ntBASIC21.09■□□□□ 0.97
Rai1Q61818 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rai1Q61818 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rai1Q61818 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.09■□□□□ 0.97
Rai1Q61818 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rai1Q61818 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Rai1Q61818 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC21.09■□□□□ 0.97
Rai1Q61818 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rai1Q61818 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rai1Q61818 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rai1Q61818 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC21.08■□□□□ 0.97
Rai1Q61818 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rai1Q61818 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Rai1Q61818 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
Rai1Q61818 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Rai1Q61818 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rai1Q61818 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rai1Q61818 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Rai1Q61818 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rai1Q61818 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC21.06■□□□□ 0.96
Rai1Q61818 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC21.06■□□□□ 0.96
Rai1Q61818 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rai1Q61818 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Rai1Q61818 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rai1Q61818 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rai1Q61818 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rai1Q61818 Gm45417-201ENSMUST00000209533 758 ntBASIC21.05■□□□□ 0.96
Rai1Q61818 Golgb1-201ENSMUST00000023534 498 ntBASIC21.05■□□□□ 0.96
Rai1Q61818 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Rai1Q61818 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rai1Q61818 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC21.04■□□□□ 0.96
Rai1Q61818 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Rai1Q61818 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.04■□□□□ 0.96
Rai1Q61818 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Rai1Q61818 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC21.03■□□□□ 0.96
Rai1Q61818 Serp2-204ENSMUST00000228055 705 ntBASIC21.03■□□□□ 0.96
Rai1Q61818 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rai1Q61818 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rai1Q61818 Gm12821-201ENSMUST00000120022 600 ntBASIC21.02■□□□□ 0.96
Rai1Q61818 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.02■□□□□ 0.96
Rai1Q61818 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Rai1Q61818 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.95
Rai1Q61818 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Rai1Q61818 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rai1Q61818 Gm10620-201ENSMUST00000098379 1332 ntBASIC21.01■□□□□ 0.95
Rai1Q61818 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rai1Q61818 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC21.01■□□□□ 0.95
Rai1Q61818 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 69.6 ms