Protein–RNA interactions for Protein: Q61418

Clcn4, H(+)/Cl(-) exchange transporter 4, mousemouse

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4Q61418 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Clcn4Q61418 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clcn4Q61418 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clcn4Q61418 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
Clcn4Q61418 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
Clcn4Q61418 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Clcn4Q61418 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Clcn4Q61418 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Clcn4Q61418 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Clcn4Q61418 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Clcn4Q61418 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Clcn4Q61418 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Clcn4Q61418 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.63■□□□□ 0.73
Clcn4Q61418 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Clcn4Q61418 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clcn4Q61418 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Clcn4Q61418 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.62■□□□□ 0.73
Clcn4Q61418 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clcn4Q61418 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC19.62■□□□□ 0.73
Clcn4Q61418 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.62■□□□□ 0.73
Clcn4Q61418 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.62■□□□□ 0.73
Clcn4Q61418 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Clcn4Q61418 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clcn4Q61418 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.61■□□□□ 0.73
Clcn4Q61418 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.61■□□□□ 0.73
Clcn4Q61418 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Clcn4Q61418 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Clcn4Q61418 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Clcn4Q61418 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Clcn4Q61418 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Clcn4Q61418 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Clcn4Q61418 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.6■□□□□ 0.73
Clcn4Q61418 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Clcn4Q61418 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Clcn4Q61418 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Clcn4Q61418 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Clcn4Q61418 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Clcn4Q61418 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Clcn4Q61418 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Clcn4Q61418 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Clcn4Q61418 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Clcn4Q61418 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Clcn4Q61418 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Clcn4Q61418 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.58■□□□□ 0.72
Clcn4Q61418 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.58■□□□□ 0.72
Clcn4Q61418 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Clcn4Q61418 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Clcn4Q61418 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Clcn4Q61418 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Clcn4Q61418 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Clcn4Q61418 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Clcn4Q61418 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Clcn4Q61418 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Clcn4Q61418 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Clcn4Q61418 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Clcn4Q61418 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.57■□□□□ 0.72
Clcn4Q61418 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Clcn4Q61418 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Clcn4Q61418 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Clcn4Q61418 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Clcn4Q61418 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Clcn4Q61418 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Clcn4Q61418 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.56■□□□□ 0.72
Clcn4Q61418 Gm22567-201ENSMUST00000175542 342 ntBASIC19.56■□□□□ 0.72
Clcn4Q61418 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Clcn4Q61418 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Clcn4Q61418 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Clcn4Q61418 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Clcn4Q61418 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Clcn4Q61418 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Clcn4Q61418 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Clcn4Q61418 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Clcn4Q61418 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Clcn4Q61418 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Clcn4Q61418 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Clcn4Q61418 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Clcn4Q61418 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
Clcn4Q61418 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.54■□□□□ 0.72
Clcn4Q61418 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.54■□□□□ 0.72
Clcn4Q61418 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Clcn4Q61418 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Clcn4Q61418 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Clcn4Q61418 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Clcn4Q61418 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.53■□□□□ 0.72
Clcn4Q61418 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Clcn4Q61418 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Clcn4Q61418 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Clcn4Q61418 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Clcn4Q61418 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.52■□□□□ 0.72
Clcn4Q61418 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.52■□□□□ 0.72
Clcn4Q61418 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Clcn4Q61418 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Clcn4Q61418 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Clcn4Q61418 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Clcn4Q61418 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Clcn4Q61418 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Clcn4Q61418 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Clcn4Q61418 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Clcn4Q61418 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Clcn4Q61418 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms