Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trav6-2Q5R1I4 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.98■□□□□ 0.63
Trav6-2Q5R1I4 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.98■□□□□ 0.63
Trav6-2Q5R1I4 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trav6-2Q5R1I4 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trav6-2Q5R1I4 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trav6-2Q5R1I4 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trav6-2Q5R1I4 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trav6-2Q5R1I4 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav6-2Q5R1I4 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav6-2Q5R1I4 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav6-2Q5R1I4 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.97■□□□□ 0.63
Trav6-2Q5R1I4 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trav6-2Q5R1I4 Gm9847-201ENSMUST00000052528 599 ntBASIC18.97■□□□□ 0.63
Trav6-2Q5R1I4 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav6-2Q5R1I4 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trav6-2Q5R1I4 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trav6-2Q5R1I4 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav6-2Q5R1I4 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Trav6-2Q5R1I4 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav6-2Q5R1I4 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Trav6-2Q5R1I4 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav6-2Q5R1I4 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav6-2Q5R1I4 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.95■□□□□ 0.62
Trav6-2Q5R1I4 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trav6-2Q5R1I4 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trav6-2Q5R1I4 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Trav6-2Q5R1I4 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Trav6-2Q5R1I4 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trav6-2Q5R1I4 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trav6-2Q5R1I4 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trav6-2Q5R1I4 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trav6-2Q5R1I4 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trav6-2Q5R1I4 Gm6934-201ENSMUST00000194780 1905 ntBASIC18.94■□□□□ 0.62
Trav6-2Q5R1I4 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trav6-2Q5R1I4 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC18.93■□□□□ 0.62
Trav6-2Q5R1I4 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Trav6-2Q5R1I4 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trav6-2Q5R1I4 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trav6-2Q5R1I4 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trav6-2Q5R1I4 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trav6-2Q5R1I4 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trav6-2Q5R1I4 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trav6-2Q5R1I4 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trav6-2Q5R1I4 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav6-2Q5R1I4 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav6-2Q5R1I4 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav6-2Q5R1I4 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav6-2Q5R1I4 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trav6-2Q5R1I4 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trav6-2Q5R1I4 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav6-2Q5R1I4 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav6-2Q5R1I4 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav6-2Q5R1I4 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Trav6-2Q5R1I4 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav6-2Q5R1I4 AC153890.1-201ENSMUST00000220021 2469 ntBASIC18.91■□□□□ 0.62
Trav6-2Q5R1I4 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Trav6-2Q5R1I4 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav6-2Q5R1I4 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trav6-2Q5R1I4 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.9■□□□□ 0.62
Trav6-2Q5R1I4 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav6-2Q5R1I4 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav6-2Q5R1I4 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Trav6-2Q5R1I4 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trav6-2Q5R1I4 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Trav6-2Q5R1I4 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC18.89■□□□□ 0.61
Trav6-2Q5R1I4 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Trav6-2Q5R1I4 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trav6-2Q5R1I4 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.89■□□□□ 0.61
Trav6-2Q5R1I4 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trav6-2Q5R1I4 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trav6-2Q5R1I4 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav6-2Q5R1I4 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trav6-2Q5R1I4 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav6-2Q5R1I4 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Trav6-2Q5R1I4 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trav6-2Q5R1I4 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC18.87■□□□□ 0.61
Trav6-2Q5R1I4 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.87■□□□□ 0.61
Trav6-2Q5R1I4 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trav6-2Q5R1I4 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC18.86■□□□□ 0.61
Trav6-2Q5R1I4 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trav6-2Q5R1I4 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Trav6-2Q5R1I4 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav6-2Q5R1I4 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav6-2Q5R1I4 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav6-2Q5R1I4 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav6-2Q5R1I4 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav6-2Q5R1I4 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav6-2Q5R1I4 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav6-2Q5R1I4 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav6-2Q5R1I4 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav6-2Q5R1I4 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav6-2Q5R1I4 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav6-2Q5R1I4 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trav6-2Q5R1I4 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.85■□□□□ 0.61
Trav6-2Q5R1I4 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav6-2Q5R1I4 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Trav6-2Q5R1I4 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav6-2Q5R1I4 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.84■□□□□ 0.61
Trav6-2Q5R1I4 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 99.2 ms