Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
Rnf20Q5DTM8 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Rnf20Q5DTM8 Gm26766-202ENSMUST00000227544 2347 ntBASIC25.57■■□□□ 1.68
Rnf20Q5DTM8 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
Rnf20Q5DTM8 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC25.57■■□□□ 1.68
Rnf20Q5DTM8 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Rnf20Q5DTM8 Gm43592-201ENSMUST00000196922 1165 ntBASIC25.57■■□□□ 1.68
Rnf20Q5DTM8 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Rnf20Q5DTM8 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Rnf20Q5DTM8 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
Rnf20Q5DTM8 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC25.56■■□□□ 1.68
Rnf20Q5DTM8 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
Rnf20Q5DTM8 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Rnf20Q5DTM8 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC25.55■■□□□ 1.68
Rnf20Q5DTM8 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC25.55■■□□□ 1.68
Rnf20Q5DTM8 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC25.55■■□□□ 1.68
Rnf20Q5DTM8 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Rnf20Q5DTM8 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC25.54■■□□□ 1.68
Rnf20Q5DTM8 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
Rnf20Q5DTM8 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC25.54■■□□□ 1.68
Rnf20Q5DTM8 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Rnf20Q5DTM8 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC25.54■■□□□ 1.68
Rnf20Q5DTM8 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Rnf20Q5DTM8 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC25.53■■□□□ 1.68
Rnf20Q5DTM8 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Rnf20Q5DTM8 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Rnf20Q5DTM8 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC25.53■■□□□ 1.68
Rnf20Q5DTM8 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Rnf20Q5DTM8 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Rnf20Q5DTM8 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Rnf20Q5DTM8 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Rnf20Q5DTM8 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC25.51■■□□□ 1.67
Rnf20Q5DTM8 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Rnf20Q5DTM8 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC25.51■■□□□ 1.67
Rnf20Q5DTM8 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Rnf20Q5DTM8 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Rnf20Q5DTM8 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Rnf20Q5DTM8 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC25.5■■□□□ 1.67
Rnf20Q5DTM8 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Rnf20Q5DTM8 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC25.5■■□□□ 1.67
Rnf20Q5DTM8 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC25.5■■□□□ 1.67
Rnf20Q5DTM8 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Rnf20Q5DTM8 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Rnf20Q5DTM8 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Rnf20Q5DTM8 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Rnf20Q5DTM8 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC25.49■■□□□ 1.67
Rnf20Q5DTM8 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Rnf20Q5DTM8 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Rnf20Q5DTM8 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Rnf20Q5DTM8 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Rnf20Q5DTM8 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Rnf20Q5DTM8 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC25.48■■□□□ 1.67
Rnf20Q5DTM8 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Rnf20Q5DTM8 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC25.48■■□□□ 1.67
Rnf20Q5DTM8 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Rnf20Q5DTM8 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC25.48■■□□□ 1.67
Rnf20Q5DTM8 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Rnf20Q5DTM8 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Rnf20Q5DTM8 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Rnf20Q5DTM8 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Rnf20Q5DTM8 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Rnf20Q5DTM8 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
Rnf20Q5DTM8 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC25.47■■□□□ 1.67
Rnf20Q5DTM8 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Rnf20Q5DTM8 Cap2-205ENSMUST00000225824 1634 ntBASIC25.46■■□□□ 1.67
Rnf20Q5DTM8 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC25.46■■□□□ 1.67
Rnf20Q5DTM8 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC25.46■■□□□ 1.67
Rnf20Q5DTM8 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC25.46■■□□□ 1.67
Rnf20Q5DTM8 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC25.45■■□□□ 1.67
Rnf20Q5DTM8 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
Rnf20Q5DTM8 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC25.45■■□□□ 1.66
Rnf20Q5DTM8 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Rnf20Q5DTM8 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC25.45■■□□□ 1.66
Rnf20Q5DTM8 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC25.45■■□□□ 1.66
Rnf20Q5DTM8 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Rnf20Q5DTM8 Gm5067-201ENSMUST00000170449 1009 ntBASIC25.44■■□□□ 1.66
Rnf20Q5DTM8 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Rnf20Q5DTM8 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Rnf20Q5DTM8 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Rnf20Q5DTM8 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Rnf20Q5DTM8 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC25.43■■□□□ 1.66
Rnf20Q5DTM8 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
Rnf20Q5DTM8 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
Rnf20Q5DTM8 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC25.43■■□□□ 1.66
Rnf20Q5DTM8 Nsd1-206ENSMUST00000224918 1001 ntBASIC25.43■■□□□ 1.66
Rnf20Q5DTM8 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC25.43■■□□□ 1.66
Rnf20Q5DTM8 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Rnf20Q5DTM8 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Rnf20Q5DTM8 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Rnf20Q5DTM8 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Rnf20Q5DTM8 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Rnf20Q5DTM8 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC25.42■■□□□ 1.66
Rnf20Q5DTM8 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Rnf20Q5DTM8 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Rnf20Q5DTM8 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC25.42■■□□□ 1.66
Rnf20Q5DTM8 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC25.42■■□□□ 1.66
Rnf20Q5DTM8 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC25.41■■□□□ 1.66
Rnf20Q5DTM8 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Rnf20Q5DTM8 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC25.41■■□□□ 1.66
Rnf20Q5DTM8 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms