Protein–RNA interactions for Protein: Q505G4

Rtl6, Retrotransposon Gag-like protein 6, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl6Q505G4 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rtl6Q505G4 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rtl6Q505G4 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Rtl6Q505G4 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rtl6Q505G4 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rtl6Q505G4 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rtl6Q505G4 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rtl6Q505G4 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rtl6Q505G4 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC18.21■□□□□ 0.51
Rtl6Q505G4 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rtl6Q505G4 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rtl6Q505G4 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rtl6Q505G4 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Rtl6Q505G4 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rtl6Q505G4 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Rtl6Q505G4 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC18.21■□□□□ 0.5
Rtl6Q505G4 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rtl6Q505G4 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rtl6Q505G4 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Rtl6Q505G4 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rtl6Q505G4 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
Rtl6Q505G4 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rtl6Q505G4 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rtl6Q505G4 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rtl6Q505G4 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC18.19■□□□□ 0.5
Rtl6Q505G4 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC18.19■□□□□ 0.5
Rtl6Q505G4 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rtl6Q505G4 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rtl6Q505G4 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rtl6Q505G4 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rtl6Q505G4 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rtl6Q505G4 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rtl6Q505G4 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Rtl6Q505G4 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Rtl6Q505G4 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
Rtl6Q505G4 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC18.18■□□□□ 0.5
Rtl6Q505G4 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rtl6Q505G4 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rtl6Q505G4 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rtl6Q505G4 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Rtl6Q505G4 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rtl6Q505G4 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC18.18■□□□□ 0.5
Rtl6Q505G4 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rtl6Q505G4 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rtl6Q505G4 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rtl6Q505G4 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rtl6Q505G4 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rtl6Q505G4 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18.16■□□□□ 0.5
Rtl6Q505G4 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rtl6Q505G4 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC18.16■□□□□ 0.5
Rtl6Q505G4 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.16■□□□□ 0.5
Rtl6Q505G4 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rtl6Q505G4 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC18.16■□□□□ 0.5
Rtl6Q505G4 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC18.16■□□□□ 0.5
Rtl6Q505G4 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC18.16■□□□□ 0.5
Rtl6Q505G4 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rtl6Q505G4 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rtl6Q505G4 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rtl6Q505G4 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rtl6Q505G4 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rtl6Q505G4 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rtl6Q505G4 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rtl6Q505G4 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18.15■□□□□ 0.5
Rtl6Q505G4 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rtl6Q505G4 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rtl6Q505G4 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC18.14■□□□□ 0.5
Rtl6Q505G4 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rtl6Q505G4 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rtl6Q505G4 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rtl6Q505G4 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC18.14■□□□□ 0.49
Rtl6Q505G4 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Rtl6Q505G4 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC18.14■□□□□ 0.49
Rtl6Q505G4 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rtl6Q505G4 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rtl6Q505G4 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rtl6Q505G4 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rtl6Q505G4 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rtl6Q505G4 Gm5522-201ENSMUST00000189483 1242 ntBASIC18.13■□□□□ 0.49
Rtl6Q505G4 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC18.13■□□□□ 0.49
Rtl6Q505G4 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rtl6Q505G4 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Rtl6Q505G4 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rtl6Q505G4 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Rtl6Q505G4 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rtl6Q505G4 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rtl6Q505G4 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rtl6Q505G4 Nsd1-206ENSMUST00000224918 1001 ntBASIC18.12■□□□□ 0.49
Rtl6Q505G4 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rtl6Q505G4 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rtl6Q505G4 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rtl6Q505G4 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
Rtl6Q505G4 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Rtl6Q505G4 Gm15546-201ENSMUST00000122095 826 ntBASIC18.11■□□□□ 0.49
Rtl6Q505G4 Gm22567-201ENSMUST00000175542 342 ntBASIC18.11■□□□□ 0.49
Rtl6Q505G4 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rtl6Q505G4 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rtl6Q505G4 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rtl6Q505G4 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rtl6Q505G4 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rtl6Q505G4 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms