Protein–RNA interactions for Protein: Q3UTB7

Foxr1, Forkhead box protein R1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxr1Q3UTB7 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Foxr1Q3UTB7 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Foxr1Q3UTB7 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
Foxr1Q3UTB7 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Foxr1Q3UTB7 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Foxr1Q3UTB7 Gm8093-201ENSMUST00000128935 1892 ntBASIC21.99■■□□□ 1.11
Foxr1Q3UTB7 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Foxr1Q3UTB7 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Foxr1Q3UTB7 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Foxr1Q3UTB7 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Foxr1Q3UTB7 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.99■■□□□ 1.11
Foxr1Q3UTB7 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Foxr1Q3UTB7 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Foxr1Q3UTB7 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC21.98■■□□□ 1.11
Foxr1Q3UTB7 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Foxr1Q3UTB7 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Foxr1Q3UTB7 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.97■■□□□ 1.11
Foxr1Q3UTB7 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC21.97■■□□□ 1.11
Foxr1Q3UTB7 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Foxr1Q3UTB7 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC21.97■■□□□ 1.11
Foxr1Q3UTB7 Gm7417-201ENSMUST00000192950 473 ntBASIC21.97■■□□□ 1.11
Foxr1Q3UTB7 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC21.97■■□□□ 1.11
Foxr1Q3UTB7 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC21.97■■□□□ 1.11
Foxr1Q3UTB7 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Foxr1Q3UTB7 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Foxr1Q3UTB7 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Foxr1Q3UTB7 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Foxr1Q3UTB7 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Foxr1Q3UTB7 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Foxr1Q3UTB7 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Foxr1Q3UTB7 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Foxr1Q3UTB7 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Foxr1Q3UTB7 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Foxr1Q3UTB7 Gm40881-201ENSMUST00000223397 166 ntBASIC21.96■■□□□ 1.11
Foxr1Q3UTB7 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Foxr1Q3UTB7 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Foxr1Q3UTB7 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
Foxr1Q3UTB7 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Foxr1Q3UTB7 Gm10399-202ENSMUST00000202768 748 ntBASIC21.95■■□□□ 1.1
Foxr1Q3UTB7 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC21.95■■□□□ 1.1
Foxr1Q3UTB7 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
Foxr1Q3UTB7 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
Foxr1Q3UTB7 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
Foxr1Q3UTB7 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Foxr1Q3UTB7 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
Foxr1Q3UTB7 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
Foxr1Q3UTB7 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Foxr1Q3UTB7 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Foxr1Q3UTB7 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Foxr1Q3UTB7 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Foxr1Q3UTB7 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC21.93■■□□□ 1.1
Foxr1Q3UTB7 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC21.93■■□□□ 1.1
Foxr1Q3UTB7 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Foxr1Q3UTB7 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Foxr1Q3UTB7 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Foxr1Q3UTB7 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Foxr1Q3UTB7 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Foxr1Q3UTB7 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Foxr1Q3UTB7 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
Foxr1Q3UTB7 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC21.92■■□□□ 1.1
Foxr1Q3UTB7 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Foxr1Q3UTB7 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Foxr1Q3UTB7 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
Foxr1Q3UTB7 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Foxr1Q3UTB7 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Foxr1Q3UTB7 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Foxr1Q3UTB7 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Foxr1Q3UTB7 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Foxr1Q3UTB7 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Foxr1Q3UTB7 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Foxr1Q3UTB7 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.89■■□□□ 1.1
Foxr1Q3UTB7 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Foxr1Q3UTB7 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Foxr1Q3UTB7 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Foxr1Q3UTB7 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC21.89■■□□□ 1.09
Foxr1Q3UTB7 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Foxr1Q3UTB7 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
Foxr1Q3UTB7 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Foxr1Q3UTB7 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Foxr1Q3UTB7 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Foxr1Q3UTB7 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Foxr1Q3UTB7 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC21.88■■□□□ 1.09
Foxr1Q3UTB7 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
Foxr1Q3UTB7 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Foxr1Q3UTB7 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC21.88■■□□□ 1.09
Foxr1Q3UTB7 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Foxr1Q3UTB7 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Foxr1Q3UTB7 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC21.87■■□□□ 1.09
Foxr1Q3UTB7 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC21.87■■□□□ 1.09
Foxr1Q3UTB7 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Foxr1Q3UTB7 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Foxr1Q3UTB7 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Foxr1Q3UTB7 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
Foxr1Q3UTB7 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Foxr1Q3UTB7 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Foxr1Q3UTB7 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC21.86■■□□□ 1.09
Foxr1Q3UTB7 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Foxr1Q3UTB7 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Foxr1Q3UTB7 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC21.85■■□□□ 1.09
Foxr1Q3UTB7 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms