Protein–RNA interactions for Protein: Q3USH5

Sfswap, Splicing factor, suppressor of white-apricot homolog, mousemouse

Known RBP Predictions only

Length 945 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SfswapQ3USH5 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC25.68■■□□□ 1.7
SfswapQ3USH5 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC25.67■■□□□ 1.7
SfswapQ3USH5 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC25.67■■□□□ 1.7
SfswapQ3USH5 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC25.67■■□□□ 1.7
SfswapQ3USH5 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
SfswapQ3USH5 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
SfswapQ3USH5 H3f3aos-201ENSMUST00000097448 2905 ntBASIC25.66■■□□□ 1.7
SfswapQ3USH5 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC25.66■■□□□ 1.7
SfswapQ3USH5 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC25.66■■□□□ 1.7
SfswapQ3USH5 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
SfswapQ3USH5 Gm8093-201ENSMUST00000128935 1892 ntBASIC25.66■■□□□ 1.7
SfswapQ3USH5 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SfswapQ3USH5 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SfswapQ3USH5 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
SfswapQ3USH5 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
SfswapQ3USH5 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC25.65■■□□□ 1.7
SfswapQ3USH5 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC25.65■■□□□ 1.7
SfswapQ3USH5 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SfswapQ3USH5 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC25.65■■□□□ 1.7
SfswapQ3USH5 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
SfswapQ3USH5 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC25.65■■□□□ 1.7
SfswapQ3USH5 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
SfswapQ3USH5 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
SfswapQ3USH5 Gm7417-201ENSMUST00000192950 473 ntBASIC25.64■■□□□ 1.7
SfswapQ3USH5 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC25.64■■□□□ 1.7
SfswapQ3USH5 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC25.64■■□□□ 1.7
SfswapQ3USH5 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC25.64■■□□□ 1.7
SfswapQ3USH5 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
SfswapQ3USH5 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC25.63■■□□□ 1.69
SfswapQ3USH5 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
SfswapQ3USH5 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
SfswapQ3USH5 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC25.63■■□□□ 1.69
SfswapQ3USH5 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SfswapQ3USH5 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SfswapQ3USH5 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SfswapQ3USH5 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC25.62■■□□□ 1.69
SfswapQ3USH5 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
SfswapQ3USH5 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
SfswapQ3USH5 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC25.61■■□□□ 1.69
SfswapQ3USH5 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC25.61■■□□□ 1.69
SfswapQ3USH5 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC25.61■■□□□ 1.69
SfswapQ3USH5 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
SfswapQ3USH5 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
SfswapQ3USH5 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
SfswapQ3USH5 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC25.6■■□□□ 1.69
SfswapQ3USH5 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
SfswapQ3USH5 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC25.59■■□□□ 1.69
SfswapQ3USH5 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC25.59■■□□□ 1.69
SfswapQ3USH5 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC25.59■■□□□ 1.69
SfswapQ3USH5 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
SfswapQ3USH5 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC25.58■■□□□ 1.69
SfswapQ3USH5 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
SfswapQ3USH5 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
SfswapQ3USH5 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC25.58■■□□□ 1.69
SfswapQ3USH5 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC25.58■■□□□ 1.69
SfswapQ3USH5 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
SfswapQ3USH5 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC25.58■■□□□ 1.68
SfswapQ3USH5 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC25.57■■□□□ 1.68
SfswapQ3USH5 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC25.57■■□□□ 1.68
SfswapQ3USH5 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
SfswapQ3USH5 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
SfswapQ3USH5 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
SfswapQ3USH5 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
SfswapQ3USH5 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC25.56■■□□□ 1.68
SfswapQ3USH5 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC25.56■■□□□ 1.68
SfswapQ3USH5 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
SfswapQ3USH5 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
SfswapQ3USH5 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
SfswapQ3USH5 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
SfswapQ3USH5 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
SfswapQ3USH5 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC25.54■■□□□ 1.68
SfswapQ3USH5 Gm40881-201ENSMUST00000223397 166 ntBASIC25.54■■□□□ 1.68
SfswapQ3USH5 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC25.54■■□□□ 1.68
SfswapQ3USH5 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC25.54■■□□□ 1.68
SfswapQ3USH5 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC25.54■■□□□ 1.68
SfswapQ3USH5 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
SfswapQ3USH5 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
SfswapQ3USH5 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
SfswapQ3USH5 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
SfswapQ3USH5 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC25.53■■□□□ 1.68
SfswapQ3USH5 Il17rd-202ENSMUST00000223942 2186 ntBASIC25.53■■□□□ 1.68
SfswapQ3USH5 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
SfswapQ3USH5 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
SfswapQ3USH5 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC25.52■■□□□ 1.68
SfswapQ3USH5 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
SfswapQ3USH5 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
SfswapQ3USH5 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
SfswapQ3USH5 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC25.51■■□□□ 1.67
SfswapQ3USH5 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
SfswapQ3USH5 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC25.51■■□□□ 1.67
SfswapQ3USH5 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
SfswapQ3USH5 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC25.51■■□□□ 1.67
SfswapQ3USH5 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
SfswapQ3USH5 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
SfswapQ3USH5 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
SfswapQ3USH5 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
SfswapQ3USH5 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC25.5■■□□□ 1.67
SfswapQ3USH5 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
SfswapQ3USH5 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
SfswapQ3USH5 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
Retrieved 100 of 76,532 protein–RNA pairs in 92.5 ms