Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
Arhgef40Q3UPH7 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
Arhgef40Q3UPH7 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC32.45■■■□□ 2.79
Arhgef40Q3UPH7 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC32.45■■■□□ 2.78
Arhgef40Q3UPH7 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
Arhgef40Q3UPH7 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC32.44■■■□□ 2.78
Arhgef40Q3UPH7 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC32.44■■■□□ 2.78
Arhgef40Q3UPH7 Gm9847-201ENSMUST00000052528 599 ntBASIC32.44■■■□□ 2.78
Arhgef40Q3UPH7 Gm6934-201ENSMUST00000194780 1905 ntBASIC32.44■■■□□ 2.78
Arhgef40Q3UPH7 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC32.44■■■□□ 2.78
Arhgef40Q3UPH7 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
Arhgef40Q3UPH7 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC32.43■■■□□ 2.78
Arhgef40Q3UPH7 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
Arhgef40Q3UPH7 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC32.42■■■□□ 2.78
Arhgef40Q3UPH7 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
Arhgef40Q3UPH7 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC32.41■■■□□ 2.78
Arhgef40Q3UPH7 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC32.41■■■□□ 2.78
Arhgef40Q3UPH7 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
Arhgef40Q3UPH7 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
Arhgef40Q3UPH7 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC32.41■■■□□ 2.78
Arhgef40Q3UPH7 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
Arhgef40Q3UPH7 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC32.41■■■□□ 2.78
Arhgef40Q3UPH7 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
Arhgef40Q3UPH7 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
Arhgef40Q3UPH7 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC32.4■■■□□ 2.78
Arhgef40Q3UPH7 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC32.4■■■□□ 2.78
Arhgef40Q3UPH7 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
Arhgef40Q3UPH7 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
Arhgef40Q3UPH7 Gm12922-201ENSMUST00000120626 809 ntBASIC32.39■■■□□ 2.78
Arhgef40Q3UPH7 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC32.39■■■□□ 2.78
Arhgef40Q3UPH7 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
Arhgef40Q3UPH7 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
Arhgef40Q3UPH7 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC32.36■■■□□ 2.77
Arhgef40Q3UPH7 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC32.36■■■□□ 2.77
Arhgef40Q3UPH7 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC32.36■■■□□ 2.77
Arhgef40Q3UPH7 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC32.36■■■□□ 2.77
Arhgef40Q3UPH7 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
Arhgef40Q3UPH7 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
Arhgef40Q3UPH7 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
Arhgef40Q3UPH7 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
Arhgef40Q3UPH7 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
Arhgef40Q3UPH7 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC32.34■■■□□ 2.77
Arhgef40Q3UPH7 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC32.33■■■□□ 2.77
Arhgef40Q3UPH7 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
Arhgef40Q3UPH7 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC32.33■■■□□ 2.77
Arhgef40Q3UPH7 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC32.33■■■□□ 2.77
Arhgef40Q3UPH7 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
Arhgef40Q3UPH7 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC32.32■■■□□ 2.76
Arhgef40Q3UPH7 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
Arhgef40Q3UPH7 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC32.32■■■□□ 2.76
Arhgef40Q3UPH7 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
Arhgef40Q3UPH7 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC32.31■■■□□ 2.76
Arhgef40Q3UPH7 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC32.31■■■□□ 2.76
Arhgef40Q3UPH7 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC32.3■■■□□ 2.76
Arhgef40Q3UPH7 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC32.3■■■□□ 2.76
Arhgef40Q3UPH7 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC32.3■■■□□ 2.76
Arhgef40Q3UPH7 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
Arhgef40Q3UPH7 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC32.3■■■□□ 2.76
Arhgef40Q3UPH7 AC153890.1-201ENSMUST00000220021 2469 ntBASIC32.29■■■□□ 2.76
Arhgef40Q3UPH7 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC32.29■■■□□ 2.76
Arhgef40Q3UPH7 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
Arhgef40Q3UPH7 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
Arhgef40Q3UPH7 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC32.28■■■□□ 2.76
Arhgef40Q3UPH7 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC32.28■■■□□ 2.76
Arhgef40Q3UPH7 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC32.28■■■□□ 2.76
Arhgef40Q3UPH7 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC32.28■■■□□ 2.76
Arhgef40Q3UPH7 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
Arhgef40Q3UPH7 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
Arhgef40Q3UPH7 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC32.26■■■□□ 2.76
Arhgef40Q3UPH7 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC32.26■■■□□ 2.76
Arhgef40Q3UPH7 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC32.26■■■□□ 2.75
Arhgef40Q3UPH7 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
Arhgef40Q3UPH7 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC32.25■■■□□ 2.75
Arhgef40Q3UPH7 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
Arhgef40Q3UPH7 Gm10620-201ENSMUST00000098379 1332 ntBASIC32.25■■■□□ 2.75
Arhgef40Q3UPH7 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC32.24■■■□□ 2.75
Arhgef40Q3UPH7 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
Arhgef40Q3UPH7 Slc35b2-207ENSMUST00000226086 850 ntBASIC32.24■■■□□ 2.75
Arhgef40Q3UPH7 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
Arhgef40Q3UPH7 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
Arhgef40Q3UPH7 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC32.23■■■□□ 2.75
Arhgef40Q3UPH7 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC32.23■■■□□ 2.75
Arhgef40Q3UPH7 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
Arhgef40Q3UPH7 Appbp2os-202ENSMUST00000206972 447 ntBASIC32.22■■■□□ 2.75
Arhgef40Q3UPH7 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
Arhgef40Q3UPH7 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
Arhgef40Q3UPH7 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
Arhgef40Q3UPH7 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC32.21■■■□□ 2.75
Arhgef40Q3UPH7 AC140930.3-201ENSMUST00000222935 274 ntBASIC32.21■■■□□ 2.75
Arhgef40Q3UPH7 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC32.21■■■□□ 2.75
Arhgef40Q3UPH7 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
Arhgef40Q3UPH7 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
Arhgef40Q3UPH7 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
Arhgef40Q3UPH7 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC32.2■■■□□ 2.74
Arhgef40Q3UPH7 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
Arhgef40Q3UPH7 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC32.19■■■□□ 2.74
Arhgef40Q3UPH7 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC32.19■■■□□ 2.74
Arhgef40Q3UPH7 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC32.18■■■□□ 2.74
Arhgef40Q3UPH7 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
Arhgef40Q3UPH7 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC32.18■■■□□ 2.74
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms