Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cks1brtQ3UNC9 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cks1brtQ3UNC9 Gm43006-201ENSMUST00000197702 1602 ntBASIC15.55■□□□□ 0.08
Cks1brtQ3UNC9 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cks1brtQ3UNC9 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Cks1brtQ3UNC9 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cks1brtQ3UNC9 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cks1brtQ3UNC9 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cks1brtQ3UNC9 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cks1brtQ3UNC9 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Cks1brtQ3UNC9 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cks1brtQ3UNC9 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cks1brtQ3UNC9 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cks1brtQ3UNC9 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cks1brtQ3UNC9 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cks1brtQ3UNC9 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cks1brtQ3UNC9 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cks1brtQ3UNC9 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cks1brtQ3UNC9 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC15.53■□□□□ 0.08
Cks1brtQ3UNC9 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cks1brtQ3UNC9 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cks1brtQ3UNC9 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cks1brtQ3UNC9 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cks1brtQ3UNC9 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Cks1brtQ3UNC9 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
Cks1brtQ3UNC9 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC15.52■□□□□ 0.08
Cks1brtQ3UNC9 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cks1brtQ3UNC9 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Cks1brtQ3UNC9 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cks1brtQ3UNC9 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cks1brtQ3UNC9 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cks1brtQ3UNC9 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cks1brtQ3UNC9 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cks1brtQ3UNC9 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Cks1brtQ3UNC9 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC15.51■□□□□ 0.07
Cks1brtQ3UNC9 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cks1brtQ3UNC9 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cks1brtQ3UNC9 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cks1brtQ3UNC9 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cks1brtQ3UNC9 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cks1brtQ3UNC9 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cks1brtQ3UNC9 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Cks1brtQ3UNC9 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Cks1brtQ3UNC9 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cks1brtQ3UNC9 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cks1brtQ3UNC9 Gm12504-201ENSMUST00000120860 2231 ntBASIC15.49■□□□□ 0.07
Cks1brtQ3UNC9 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cks1brtQ3UNC9 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cks1brtQ3UNC9 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Cks1brtQ3UNC9 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cks1brtQ3UNC9 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cks1brtQ3UNC9 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Cks1brtQ3UNC9 Gm26115-201ENSMUST00000175605 87 ntBASIC15.49■□□□□ 0.07
Cks1brtQ3UNC9 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Cks1brtQ3UNC9 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cks1brtQ3UNC9 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cks1brtQ3UNC9 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cks1brtQ3UNC9 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cks1brtQ3UNC9 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cks1brtQ3UNC9 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
Cks1brtQ3UNC9 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cks1brtQ3UNC9 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cks1brtQ3UNC9 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cks1brtQ3UNC9 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Cks1brtQ3UNC9 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Cks1brtQ3UNC9 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Cks1brtQ3UNC9 Hsf1-207ENSMUST00000228371 2102 ntBASIC15.47■□□□□ 0.07
Cks1brtQ3UNC9 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cks1brtQ3UNC9 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Cks1brtQ3UNC9 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cks1brtQ3UNC9 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cks1brtQ3UNC9 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cks1brtQ3UNC9 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cks1brtQ3UNC9 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cks1brtQ3UNC9 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cks1brtQ3UNC9 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Cks1brtQ3UNC9 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cks1brtQ3UNC9 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cks1brtQ3UNC9 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC15.46■□□□□ 0.07
Cks1brtQ3UNC9 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
Cks1brtQ3UNC9 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cks1brtQ3UNC9 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cks1brtQ3UNC9 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Cks1brtQ3UNC9 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Cks1brtQ3UNC9 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cks1brtQ3UNC9 AC153524.1-201ENSMUST00000220436 1935 ntBASIC15.45■□□□□ 0.06
Cks1brtQ3UNC9 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Cks1brtQ3UNC9 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cks1brtQ3UNC9 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cks1brtQ3UNC9 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cks1brtQ3UNC9 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Cks1brtQ3UNC9 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
Cks1brtQ3UNC9 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cks1brtQ3UNC9 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Cks1brtQ3UNC9 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cks1brtQ3UNC9 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cks1brtQ3UNC9 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cks1brtQ3UNC9 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Cks1brtQ3UNC9 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Cks1brtQ3UNC9 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 199.5 ms