Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC26.38■■□□□ 1.81
Rnf180Q3U827 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC26.38■■□□□ 1.81
Rnf180Q3U827 Gm8493-201ENSMUST00000196881 489 ntBASIC26.37■■□□□ 1.81
Rnf180Q3U827 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC26.37■■□□□ 1.81
Rnf180Q3U827 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
Rnf180Q3U827 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Rnf180Q3U827 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC26.36■■□□□ 1.81
Rnf180Q3U827 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC26.36■■□□□ 1.81
Rnf180Q3U827 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Rnf180Q3U827 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC26.35■■□□□ 1.81
Rnf180Q3U827 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Rnf180Q3U827 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
Rnf180Q3U827 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Rnf180Q3U827 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Rnf180Q3U827 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Rnf180Q3U827 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Rnf180Q3U827 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC26.34■■□□□ 1.81
Rnf180Q3U827 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Rnf180Q3U827 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Rnf180Q3U827 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Rnf180Q3U827 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Rnf180Q3U827 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Rnf180Q3U827 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Rnf180Q3U827 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC26.33■■□□□ 1.81
Rnf180Q3U827 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Rnf180Q3U827 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC26.33■■□□□ 1.8
Rnf180Q3U827 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Rnf180Q3U827 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Rnf180Q3U827 Gm12669-201ENSMUST00000122162 1009 ntBASIC26.32■■□□□ 1.8
Rnf180Q3U827 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC26.32■■□□□ 1.8
Rnf180Q3U827 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Rnf180Q3U827 Gm22325-201ENSMUST00000158904 308 ntBASIC26.32■■□□□ 1.8
Rnf180Q3U827 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Rnf180Q3U827 Gm10849-201ENSMUST00000100397 618 ntBASIC26.31■■□□□ 1.8
Rnf180Q3U827 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Rnf180Q3U827 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC26.31■■□□□ 1.8
Rnf180Q3U827 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
Rnf180Q3U827 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Rnf180Q3U827 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Rnf180Q3U827 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Rnf180Q3U827 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Rnf180Q3U827 Gm10493-201ENSMUST00000097270 612 ntBASIC26.3■■□□□ 1.8
Rnf180Q3U827 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Rnf180Q3U827 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Rnf180Q3U827 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC26.29■■□□□ 1.8
Rnf180Q3U827 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC26.29■■□□□ 1.8
Rnf180Q3U827 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Rnf180Q3U827 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Rnf180Q3U827 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Rnf180Q3U827 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC26.27■■□□□ 1.8
Rnf180Q3U827 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Rnf180Q3U827 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Rnf180Q3U827 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
Rnf180Q3U827 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
Rnf180Q3U827 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Rnf180Q3U827 Gm8093-201ENSMUST00000128935 1892 ntBASIC26.25■■□□□ 1.79
Rnf180Q3U827 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Rnf180Q3U827 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Rnf180Q3U827 Gm42642-201ENSMUST00000200683 355 ntBASIC26.25■■□□□ 1.79
Rnf180Q3U827 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Rnf180Q3U827 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
Rnf180Q3U827 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC26.23■■□□□ 1.79
Rnf180Q3U827 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC26.23■■□□□ 1.79
Rnf180Q3U827 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC26.23■■□□□ 1.79
Rnf180Q3U827 Wdr70-203ENSMUST00000227371 1130 ntBASIC26.23■■□□□ 1.79
Rnf180Q3U827 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
Rnf180Q3U827 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Rnf180Q3U827 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
Rnf180Q3U827 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Rnf180Q3U827 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Rnf180Q3U827 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC26.22■■□□□ 1.79
Rnf180Q3U827 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Rnf180Q3U827 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Rnf180Q3U827 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Rnf180Q3U827 AC164433.2-201ENSMUST00000226346 1701 ntBASIC26.22■■□□□ 1.79
Rnf180Q3U827 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC26.21■■□□□ 1.79
Rnf180Q3U827 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC26.21■■□□□ 1.79
Rnf180Q3U827 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Rnf180Q3U827 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Rnf180Q3U827 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC26.21■■□□□ 1.79
Rnf180Q3U827 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
Rnf180Q3U827 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC26.2■■□□□ 1.79
Rnf180Q3U827 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Rnf180Q3U827 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
Rnf180Q3U827 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.78
Rnf180Q3U827 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
Rnf180Q3U827 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.78
Rnf180Q3U827 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC26.19■■□□□ 1.78
Rnf180Q3U827 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC26.19■■□□□ 1.78
Rnf180Q3U827 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Rnf180Q3U827 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC26.17■■□□□ 1.78
Rnf180Q3U827 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Rnf180Q3U827 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC26.17■■□□□ 1.78
Rnf180Q3U827 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
Rnf180Q3U827 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC26.16■■□□□ 1.78
Rnf180Q3U827 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Rnf180Q3U827 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC26.15■■□□□ 1.78
Rnf180Q3U827 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Rnf180Q3U827 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC26.15■■□□□ 1.78
Rnf180Q3U827 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
Retrieved 100 of 76,532 protein–RNA pairs in 122.5 ms