Protein–RNA interactions for Protein: Q2TV84

Trpm1, Transient receptor potential cation channel subfamily M member 1, mousemouse

Predictions only

Length 1,622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm1Q2TV84 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC31.62■■■□□ 2.65
Trpm1Q2TV84 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC31.62■■■□□ 2.65
Trpm1Q2TV84 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
Trpm1Q2TV84 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
Trpm1Q2TV84 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC31.61■■■□□ 2.65
Trpm1Q2TV84 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
Trpm1Q2TV84 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
Trpm1Q2TV84 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
Trpm1Q2TV84 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC31.6■■■□□ 2.65
Trpm1Q2TV84 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC31.6■■■□□ 2.65
Trpm1Q2TV84 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC31.6■■■□□ 2.65
Trpm1Q2TV84 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Trpm1Q2TV84 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC31.6■■■□□ 2.65
Trpm1Q2TV84 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Trpm1Q2TV84 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Trpm1Q2TV84 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Trpm1Q2TV84 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
Trpm1Q2TV84 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Trpm1Q2TV84 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Trpm1Q2TV84 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC31.57■■■□□ 2.64
Trpm1Q2TV84 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC31.56■■■□□ 2.64
Trpm1Q2TV84 Gm8495-201ENSMUST00000188740 694 ntBASIC31.56■■■□□ 2.64
Trpm1Q2TV84 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Trpm1Q2TV84 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC31.55■■■□□ 2.64
Trpm1Q2TV84 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Trpm1Q2TV84 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
Trpm1Q2TV84 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
Trpm1Q2TV84 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
Trpm1Q2TV84 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Trpm1Q2TV84 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Trpm1Q2TV84 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Trpm1Q2TV84 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC31.52■■■□□ 2.64
Trpm1Q2TV84 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Trpm1Q2TV84 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC31.51■■■□□ 2.63
Trpm1Q2TV84 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
Trpm1Q2TV84 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
Trpm1Q2TV84 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC31.51■■■□□ 2.63
Trpm1Q2TV84 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
Trpm1Q2TV84 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Trpm1Q2TV84 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC31.5■■■□□ 2.63
Trpm1Q2TV84 Gm10620-201ENSMUST00000098379 1332 ntBASIC31.5■■■□□ 2.63
Trpm1Q2TV84 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC31.49■■■□□ 2.63
Trpm1Q2TV84 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC31.49■■■□□ 2.63
Trpm1Q2TV84 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC31.49■■■□□ 2.63
Trpm1Q2TV84 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Trpm1Q2TV84 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Trpm1Q2TV84 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Trpm1Q2TV84 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Trpm1Q2TV84 Flvcr1-202ENSMUST00000191946 1216 ntBASIC31.48■■■□□ 2.63
Trpm1Q2TV84 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Trpm1Q2TV84 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
Trpm1Q2TV84 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC31.47■■■□□ 2.63
Trpm1Q2TV84 Gm28731-201ENSMUST00000185564 1569 ntBASIC31.47■■■□□ 2.63
Trpm1Q2TV84 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Trpm1Q2TV84 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
Trpm1Q2TV84 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC31.46■■■□□ 2.63
Trpm1Q2TV84 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC31.46■■■□□ 2.63
Trpm1Q2TV84 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
Trpm1Q2TV84 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC31.45■■■□□ 2.63
Trpm1Q2TV84 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
Trpm1Q2TV84 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC31.45■■■□□ 2.62
Trpm1Q2TV84 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC31.45■■■□□ 2.62
Trpm1Q2TV84 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC31.45■■■□□ 2.62
Trpm1Q2TV84 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
Trpm1Q2TV84 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
Trpm1Q2TV84 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Trpm1Q2TV84 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Trpm1Q2TV84 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC31.43■■■□□ 2.62
Trpm1Q2TV84 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC31.43■■■□□ 2.62
Trpm1Q2TV84 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Trpm1Q2TV84 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
Trpm1Q2TV84 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC31.42■■■□□ 2.62
Trpm1Q2TV84 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Trpm1Q2TV84 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Trpm1Q2TV84 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Trpm1Q2TV84 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Trpm1Q2TV84 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC31.41■■■□□ 2.62
Trpm1Q2TV84 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Trpm1Q2TV84 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC31.4■■■□□ 2.62
Trpm1Q2TV84 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Trpm1Q2TV84 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC31.4■■■□□ 2.62
Trpm1Q2TV84 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC31.4■■■□□ 2.62
Trpm1Q2TV84 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC31.4■■■□□ 2.62
Trpm1Q2TV84 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC31.39■■■□□ 2.62
Trpm1Q2TV84 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
Trpm1Q2TV84 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC31.39■■■□□ 2.62
Trpm1Q2TV84 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
Trpm1Q2TV84 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
Trpm1Q2TV84 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC31.38■■■□□ 2.61
Trpm1Q2TV84 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Trpm1Q2TV84 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
Trpm1Q2TV84 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC31.38■■■□□ 2.61
Trpm1Q2TV84 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC31.38■■■□□ 2.61
Trpm1Q2TV84 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC31.38■■■□□ 2.61
Trpm1Q2TV84 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Trpm1Q2TV84 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC31.38■■■□□ 2.61
Trpm1Q2TV84 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC31.37■■■□□ 2.61
Trpm1Q2TV84 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Trpm1Q2TV84 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Trpm1Q2TV84 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms