Protein–RNA interactions for Protein: P98083

Shc1, SHC-transforming protein 1, mousemouse

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shc1P98083 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Shc1P98083 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Shc1P98083 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Shc1P98083 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Shc1P98083 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Shc1P98083 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Shc1P98083 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Shc1P98083 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Shc1P98083 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Shc1P98083 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.29■□□□□ 0.68
Shc1P98083 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.29■□□□□ 0.68
Shc1P98083 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Shc1P98083 Gm45444-201ENSMUST00000211394 898 ntBASIC19.29■□□□□ 0.68
Shc1P98083 Nsd1-206ENSMUST00000224918 1001 ntBASIC19.29■□□□□ 0.68
Shc1P98083 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Shc1P98083 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Shc1P98083 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Shc1P98083 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Shc1P98083 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Shc1P98083 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Shc1P98083 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Shc1P98083 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Shc1P98083 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Shc1P98083 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Shc1P98083 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.28■□□□□ 0.68
Shc1P98083 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC19.28■□□□□ 0.68
Shc1P98083 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Shc1P98083 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Shc1P98083 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.28■□□□□ 0.68
Shc1P98083 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Shc1P98083 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Shc1P98083 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Shc1P98083 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
Shc1P98083 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Shc1P98083 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
Shc1P98083 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Shc1P98083 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Shc1P98083 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Shc1P98083 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Shc1P98083 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
Shc1P98083 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Shc1P98083 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Shc1P98083 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Shc1P98083 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.26■□□□□ 0.67
Shc1P98083 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Shc1P98083 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Shc1P98083 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Shc1P98083 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Shc1P98083 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.25■□□□□ 0.67
Shc1P98083 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Shc1P98083 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Shc1P98083 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Shc1P98083 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Shc1P98083 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Shc1P98083 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Shc1P98083 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.24■□□□□ 0.67
Shc1P98083 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Shc1P98083 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Shc1P98083 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Shc1P98083 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Shc1P98083 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Shc1P98083 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
Shc1P98083 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Shc1P98083 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.24■□□□□ 0.67
Shc1P98083 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.24■□□□□ 0.67
Shc1P98083 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
Shc1P98083 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.23■□□□□ 0.67
Shc1P98083 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Shc1P98083 Gm43566-201ENSMUST00000196851 808 ntBASIC19.23■□□□□ 0.67
Shc1P98083 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Shc1P98083 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Shc1P98083 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.23■□□□□ 0.67
Shc1P98083 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shc1P98083 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
Shc1P98083 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.22■□□□□ 0.67
Shc1P98083 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shc1P98083 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Shc1P98083 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shc1P98083 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shc1P98083 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shc1P98083 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Shc1P98083 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Shc1P98083 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Shc1P98083 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Shc1P98083 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
Shc1P98083 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Shc1P98083 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Shc1P98083 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Shc1P98083 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Shc1P98083 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Shc1P98083 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Shc1P98083 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Shc1P98083 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Shc1P98083 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Shc1P98083 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Shc1P98083 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Shc1P98083 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.2■□□□□ 0.66
Shc1P98083 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Shc1P98083 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Shc1P98083 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms