Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Tpm1P58771 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC23.81■■□□□ 1.4
Tpm1P58771 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC23.81■■□□□ 1.4
Tpm1P58771 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC23.81■■□□□ 1.4
Tpm1P58771 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Tpm1P58771 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Tpm1P58771 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Tpm1P58771 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC23.8■■□□□ 1.4
Tpm1P58771 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Tpm1P58771 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC23.8■■□□□ 1.4
Tpm1P58771 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC23.8■■□□□ 1.4
Tpm1P58771 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Tpm1P58771 Hsf1-207ENSMUST00000228371 2102 ntBASIC23.8■■□□□ 1.4
Tpm1P58771 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Tpm1P58771 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC23.79■■□□□ 1.4
Tpm1P58771 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Tpm1P58771 AC153962.1-201ENSMUST00000218530 1948 ntBASIC23.79■■□□□ 1.4
Tpm1P58771 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Tpm1P58771 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
Tpm1P58771 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC23.79■■□□□ 1.4
Tpm1P58771 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
Tpm1P58771 AC154454.1-201ENSMUST00000225253 216 ntBASIC23.79■■□□□ 1.4
Tpm1P58771 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Tpm1P58771 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Tpm1P58771 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Tpm1P58771 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC23.78■■□□□ 1.4
Tpm1P58771 Gm37415-201ENSMUST00000192265 2054 ntBASIC23.78■■□□□ 1.4
Tpm1P58771 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Tpm1P58771 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC23.78■■□□□ 1.4
Tpm1P58771 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Tpm1P58771 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Tpm1P58771 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Tpm1P58771 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC23.77■■□□□ 1.4
Tpm1P58771 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC23.77■■□□□ 1.4
Tpm1P58771 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Tpm1P58771 Gm12504-201ENSMUST00000120860 2231 ntBASIC23.76■■□□□ 1.39
Tpm1P58771 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Tpm1P58771 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Tpm1P58771 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC23.76■■□□□ 1.39
Tpm1P58771 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Tpm1P58771 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Tpm1P58771 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Tpm1P58771 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC23.76■■□□□ 1.39
Tpm1P58771 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
Tpm1P58771 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Tpm1P58771 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Tpm1P58771 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Tpm1P58771 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Tpm1P58771 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Tpm1P58771 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Tpm1P58771 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Tpm1P58771 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Tpm1P58771 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
Tpm1P58771 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Tpm1P58771 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Tpm1P58771 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Tpm1P58771 AC115037.1-201ENSMUST00000223391 2173 ntBASIC23.72■■□□□ 1.39
Tpm1P58771 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Tpm1P58771 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Tpm1P58771 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Tpm1P58771 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Tpm1P58771 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Tpm1P58771 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Tpm1P58771 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Tpm1P58771 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC23.71■■□□□ 1.39
Tpm1P58771 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
Tpm1P58771 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
Tpm1P58771 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Tpm1P58771 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Tpm1P58771 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
Tpm1P58771 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Tpm1P58771 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Tpm1P58771 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Tpm1P58771 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Tpm1P58771 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Tpm1P58771 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
Tpm1P58771 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC23.69■■□□□ 1.38
Tpm1P58771 Gm45364-201ENSMUST00000210883 159 ntBASIC23.69■■□□□ 1.38
Tpm1P58771 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Tpm1P58771 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Tpm1P58771 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Tpm1P58771 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Tpm1P58771 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Tpm1P58771 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Tpm1P58771 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Tpm1P58771 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
Tpm1P58771 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Tpm1P58771 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Tpm1P58771 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
Tpm1P58771 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Tpm1P58771 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Tpm1P58771 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
Tpm1P58771 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Tpm1P58771 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Tpm1P58771 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Tpm1P58771 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
Tpm1P58771 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC23.67■■□□□ 1.38
Tpm1P58771 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Tpm1P58771 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
Tpm1P58771 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms