Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Nkx2-2P42586 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nkx2-2P42586 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.78■□□□□ 0.76
Nkx2-2P42586 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Nkx2-2P42586 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.77■□□□□ 0.76
Nkx2-2P42586 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.77■□□□□ 0.76
Nkx2-2P42586 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nkx2-2P42586 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.77■□□□□ 0.76
Nkx2-2P42586 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nkx2-2P42586 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Nkx2-2P42586 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.76■□□□□ 0.75
Nkx2-2P42586 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Nkx2-2P42586 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.76■□□□□ 0.75
Nkx2-2P42586 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nkx2-2P42586 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nkx2-2P42586 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Nkx2-2P42586 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nkx2-2P42586 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nkx2-2P42586 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nkx2-2P42586 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.75■□□□□ 0.75
Nkx2-2P42586 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Nkx2-2P42586 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC19.75■□□□□ 0.75
Nkx2-2P42586 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nkx2-2P42586 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nkx2-2P42586 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nkx2-2P42586 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC19.74■□□□□ 0.75
Nkx2-2P42586 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Nkx2-2P42586 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.74■□□□□ 0.75
Nkx2-2P42586 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nkx2-2P42586 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nkx2-2P42586 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.74■□□□□ 0.75
Nkx2-2P42586 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nkx2-2P42586 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nkx2-2P42586 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Nkx2-2P42586 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.73■□□□□ 0.75
Nkx2-2P42586 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nkx2-2P42586 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.73■□□□□ 0.75
Nkx2-2P42586 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nkx2-2P42586 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Nkx2-2P42586 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Nkx2-2P42586 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nkx2-2P42586 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nkx2-2P42586 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Nkx2-2P42586 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Nkx2-2P42586 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.72■□□□□ 0.75
Nkx2-2P42586 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nkx2-2P42586 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Nkx2-2P42586 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nkx2-2P42586 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nkx2-2P42586 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nkx2-2P42586 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nkx2-2P42586 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.71■□□□□ 0.75
Nkx2-2P42586 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nkx2-2P42586 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Nkx2-2P42586 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nkx2-2P42586 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nkx2-2P42586 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nkx2-2P42586 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
Nkx2-2P42586 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC19.7■□□□□ 0.74
Nkx2-2P42586 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nkx2-2P42586 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nkx2-2P42586 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nkx2-2P42586 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nkx2-2P42586 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nkx2-2P42586 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
Nkx2-2P42586 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nkx2-2P42586 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Nkx2-2P42586 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.69■□□□□ 0.74
Nkx2-2P42586 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nkx2-2P42586 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nkx2-2P42586 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nkx2-2P42586 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Nkx2-2P42586 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Nkx2-2P42586 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nkx2-2P42586 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nkx2-2P42586 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.68■□□□□ 0.74
Nkx2-2P42586 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nkx2-2P42586 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Nkx2-2P42586 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nkx2-2P42586 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nkx2-2P42586 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.67■□□□□ 0.74
Nkx2-2P42586 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.67■□□□□ 0.74
Nkx2-2P42586 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nkx2-2P42586 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nkx2-2P42586 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nkx2-2P42586 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nkx2-2P42586 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.67■□□□□ 0.74
Nkx2-2P42586 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nkx2-2P42586 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Nkx2-2P42586 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nkx2-2P42586 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nkx2-2P42586 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nkx2-2P42586 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Nkx2-2P42586 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Nkx2-2P42586 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nkx2-2P42586 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nkx2-2P42586 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Nkx2-2P42586 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nkx2-2P42586 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Nkx2-2P42586 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms