Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Timp3P39876 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
Timp3P39876 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Timp3P39876 Gm22567-201ENSMUST00000175542 342 ntBASIC17.47■□□□□ 0.39
Timp3P39876 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC17.47■□□□□ 0.39
Timp3P39876 Gm42501-201ENSMUST00000200220 1026 ntBASIC17.47■□□□□ 0.39
Timp3P39876 Gm18755-201ENSMUST00000218030 1099 ntBASIC17.47■□□□□ 0.39
Timp3P39876 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Timp3P39876 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Timp3P39876 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Timp3P39876 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Timp3P39876 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Timp3P39876 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Timp3P39876 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Timp3P39876 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Timp3P39876 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC17.46■□□□□ 0.39
Timp3P39876 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Timp3P39876 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC17.46■□□□□ 0.39
Timp3P39876 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Timp3P39876 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Timp3P39876 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Timp3P39876 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC17.45■□□□□ 0.38
Timp3P39876 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Timp3P39876 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Timp3P39876 Rps24-207ENSMUST00000224568 714 ntBASIC17.44■□□□□ 0.38
Timp3P39876 AC093043.1-201ENSMUST00000226700 898 ntBASIC17.44■□□□□ 0.38
Timp3P39876 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Timp3P39876 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Timp3P39876 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Timp3P39876 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Timp3P39876 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Timp3P39876 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Timp3P39876 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Timp3P39876 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC17.43■□□□□ 0.38
Timp3P39876 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Timp3P39876 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
Timp3P39876 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Timp3P39876 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Timp3P39876 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Timp3P39876 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Timp3P39876 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Timp3P39876 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Timp3P39876 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Timp3P39876 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Timp3P39876 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Timp3P39876 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Timp3P39876 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Timp3P39876 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Timp3P39876 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Timp3P39876 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Timp3P39876 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Timp3P39876 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Timp3P39876 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Timp3P39876 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Timp3P39876 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Timp3P39876 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Timp3P39876 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Timp3P39876 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Timp3P39876 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Timp3P39876 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Timp3P39876 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Timp3P39876 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC17.4■□□□□ 0.38
Timp3P39876 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Timp3P39876 Gm38160-201ENSMUST00000193090 2499 ntBASIC17.4■□□□□ 0.38
Timp3P39876 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Timp3P39876 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Timp3P39876 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Timp3P39876 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.38
Timp3P39876 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Timp3P39876 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC17.39■□□□□ 0.37
Timp3P39876 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Timp3P39876 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Timp3P39876 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Timp3P39876 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Timp3P39876 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC17.39■□□□□ 0.37
Timp3P39876 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC17.39■□□□□ 0.37
Timp3P39876 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Timp3P39876 Gm10232-201ENSMUST00000089221 720 ntBASIC17.39■□□□□ 0.37
Timp3P39876 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Timp3P39876 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Timp3P39876 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Timp3P39876 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Timp3P39876 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Timp3P39876 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Timp3P39876 Gm45102-201ENSMUST00000207427 857 ntBASIC17.38■□□□□ 0.37
Timp3P39876 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC17.38■□□□□ 0.37
Timp3P39876 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Timp3P39876 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Timp3P39876 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC17.38■□□□□ 0.37
Timp3P39876 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Timp3P39876 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Timp3P39876 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Timp3P39876 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Timp3P39876 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Timp3P39876 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Timp3P39876 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Timp3P39876 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC17.36■□□□□ 0.37
Timp3P39876 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC17.36■□□□□ 0.37
Timp3P39876 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Timp3P39876 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms