Protein–RNA interactions for Protein: P35278

Rab5c, Ras-related protein Rab-5C, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab5cP35278 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rab5cP35278 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Rab5cP35278 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Rab5cP35278 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rab5cP35278 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rab5cP35278 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rab5cP35278 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rab5cP35278 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rab5cP35278 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Rab5cP35278 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rab5cP35278 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC17.47■□□□□ 0.39
Rab5cP35278 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rab5cP35278 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rab5cP35278 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rab5cP35278 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rab5cP35278 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rab5cP35278 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC17.47■□□□□ 0.39
Rab5cP35278 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rab5cP35278 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rab5cP35278 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.47■□□□□ 0.39
Rab5cP35278 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rab5cP35278 AC115037.1-201ENSMUST00000223391 2173 ntBASIC17.46■□□□□ 0.39
Rab5cP35278 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rab5cP35278 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rab5cP35278 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rab5cP35278 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Rab5cP35278 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rab5cP35278 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rab5cP35278 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rab5cP35278 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rab5cP35278 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.45■□□□□ 0.38
Rab5cP35278 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rab5cP35278 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rab5cP35278 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rab5cP35278 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rab5cP35278 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rab5cP35278 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rab5cP35278 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC17.45■□□□□ 0.38
Rab5cP35278 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rab5cP35278 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rab5cP35278 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rab5cP35278 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rab5cP35278 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rab5cP35278 Gm8093-201ENSMUST00000128935 1892 ntBASIC17.44■□□□□ 0.38
Rab5cP35278 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rab5cP35278 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rab5cP35278 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Rab5cP35278 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rab5cP35278 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rab5cP35278 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rab5cP35278 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rab5cP35278 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rab5cP35278 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC17.43■□□□□ 0.38
Rab5cP35278 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rab5cP35278 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rab5cP35278 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Rab5cP35278 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rab5cP35278 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rab5cP35278 Gm4430-201ENSMUST00000192413 1943 ntBASIC17.42■□□□□ 0.38
Rab5cP35278 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rab5cP35278 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rab5cP35278 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rab5cP35278 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rab5cP35278 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
Rab5cP35278 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rab5cP35278 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rab5cP35278 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Rab5cP35278 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Rab5cP35278 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rab5cP35278 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rab5cP35278 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Rab5cP35278 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rab5cP35278 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rab5cP35278 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rab5cP35278 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Rab5cP35278 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.4■□□□□ 0.38
Rab5cP35278 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
Rab5cP35278 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rab5cP35278 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rab5cP35278 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Rab5cP35278 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC17.39■□□□□ 0.38
Rab5cP35278 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC17.39■□□□□ 0.37
Rab5cP35278 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rab5cP35278 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC17.39■□□□□ 0.37
Rab5cP35278 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rab5cP35278 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rab5cP35278 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rab5cP35278 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Rab5cP35278 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rab5cP35278 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rab5cP35278 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rab5cP35278 Gm42418-201ENSMUST00000182010 1831 ntBASIC17.38■□□□□ 0.37
Rab5cP35278 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
Rab5cP35278 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rab5cP35278 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rab5cP35278 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rab5cP35278 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rab5cP35278 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rab5cP35278 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rab5cP35278 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms