Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Mmp13P33435 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Mmp13P33435 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
Mmp13P33435 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Mmp13P33435 Gm44428-201ENSMUST00000204474 874 ntBASIC21.91■■□□□ 1.1
Mmp13P33435 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Mmp13P33435 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Mmp13P33435 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Mmp13P33435 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Mmp13P33435 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Mmp13P33435 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Mmp13P33435 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Mmp13P33435 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Mmp13P33435 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Mmp13P33435 AC151971.4-201ENSMUST00000214717 704 ntBASIC21.89■■□□□ 1.09
Mmp13P33435 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Mmp13P33435 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Mmp13P33435 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Mmp13P33435 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Mmp13P33435 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Mmp13P33435 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Mmp13P33435 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Mmp13P33435 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Mmp13P33435 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC21.87■■□□□ 1.09
Mmp13P33435 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Mmp13P33435 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Mmp13P33435 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Mmp13P33435 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC21.86■■□□□ 1.09
Mmp13P33435 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Mmp13P33435 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC21.86■■□□□ 1.09
Mmp13P33435 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.86■■□□□ 1.09
Mmp13P33435 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Mmp13P33435 AC117245.4-201ENSMUST00000217388 1646 ntBASIC21.86■■□□□ 1.09
Mmp13P33435 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Mmp13P33435 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.86■■□□□ 1.09
Mmp13P33435 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Mmp13P33435 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.85■■□□□ 1.09
Mmp13P33435 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Mmp13P33435 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Mmp13P33435 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Mmp13P33435 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Mmp13P33435 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC21.84■■□□□ 1.09
Mmp13P33435 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Mmp13P33435 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Mmp13P33435 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
Mmp13P33435 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.83■■□□□ 1.09
Mmp13P33435 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
Mmp13P33435 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21.83■■□□□ 1.09
Mmp13P33435 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.83■■□□□ 1.08
Mmp13P33435 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
Mmp13P33435 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Mmp13P33435 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21.82■■□□□ 1.08
Mmp13P33435 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Mmp13P33435 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Mmp13P33435 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Mmp13P33435 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Mmp13P33435 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Mmp13P33435 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Mmp13P33435 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.81■■□□□ 1.08
Mmp13P33435 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Mmp13P33435 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Mmp13P33435 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Mmp13P33435 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Mmp13P33435 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Mmp13P33435 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Mmp13P33435 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.8■■□□□ 1.08
Mmp13P33435 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Mmp13P33435 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Mmp13P33435 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Mmp13P33435 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC21.79■■□□□ 1.08
Mmp13P33435 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.79■■□□□ 1.08
Mmp13P33435 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.79■■□□□ 1.08
Mmp13P33435 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.79■■□□□ 1.08
Mmp13P33435 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC21.79■■□□□ 1.08
Mmp13P33435 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC21.79■■□□□ 1.08
Mmp13P33435 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.79■■□□□ 1.08
Mmp13P33435 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Mmp13P33435 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Mmp13P33435 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Mmp13P33435 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Mmp13P33435 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Mmp13P33435 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Mmp13P33435 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Mmp13P33435 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Mmp13P33435 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Mmp13P33435 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Mmp13P33435 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Mmp13P33435 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Mmp13P33435 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC21.77■■□□□ 1.07
Mmp13P33435 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.77■■□□□ 1.07
Mmp13P33435 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Mmp13P33435 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Mmp13P33435 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Mmp13P33435 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Mmp13P33435 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Mmp13P33435 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Mmp13P33435 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Mmp13P33435 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Mmp13P33435 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Mmp13P33435 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms