Protein–RNA interactions for Protein: P32043

Hoxc5, Homeobox protein Hox-C5, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc5P32043 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Hoxc5P32043 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hoxc5P32043 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hoxc5P32043 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.82■□□□□ 0.76
Hoxc5P32043 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.82■□□□□ 0.76
Hoxc5P32043 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.81■□□□□ 0.76
Hoxc5P32043 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.81■□□□□ 0.76
Hoxc5P32043 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hoxc5P32043 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hoxc5P32043 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hoxc5P32043 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Hoxc5P32043 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hoxc5P32043 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hoxc5P32043 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hoxc5P32043 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.8■□□□□ 0.76
Hoxc5P32043 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hoxc5P32043 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hoxc5P32043 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hoxc5P32043 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Hoxc5P32043 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Hoxc5P32043 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hoxc5P32043 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hoxc5P32043 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.79■□□□□ 0.76
Hoxc5P32043 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hoxc5P32043 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Hoxc5P32043 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Hoxc5P32043 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.78■□□□□ 0.76
Hoxc5P32043 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hoxc5P32043 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.78■□□□□ 0.76
Hoxc5P32043 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hoxc5P32043 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hoxc5P32043 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hoxc5P32043 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Hoxc5P32043 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hoxc5P32043 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hoxc5P32043 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
Hoxc5P32043 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Hoxc5P32043 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hoxc5P32043 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC19.77■□□□□ 0.76
Hoxc5P32043 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hoxc5P32043 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hoxc5P32043 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Hoxc5P32043 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hoxc5P32043 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Hoxc5P32043 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Hoxc5P32043 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hoxc5P32043 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hoxc5P32043 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.76■□□□□ 0.75
Hoxc5P32043 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hoxc5P32043 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hoxc5P32043 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.75■□□□□ 0.75
Hoxc5P32043 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Hoxc5P32043 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hoxc5P32043 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Hoxc5P32043 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Hoxc5P32043 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hoxc5P32043 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Hoxc5P32043 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Hoxc5P32043 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Hoxc5P32043 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hoxc5P32043 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hoxc5P32043 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Hoxc5P32043 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.73■□□□□ 0.75
Hoxc5P32043 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hoxc5P32043 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Hoxc5P32043 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hoxc5P32043 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Hoxc5P32043 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hoxc5P32043 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hoxc5P32043 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hoxc5P32043 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hoxc5P32043 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hoxc5P32043 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hoxc5P32043 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hoxc5P32043 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Hoxc5P32043 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.72■□□□□ 0.75
Hoxc5P32043 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC19.72■□□□□ 0.75
Hoxc5P32043 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hoxc5P32043 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Hoxc5P32043 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hoxc5P32043 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hoxc5P32043 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Hoxc5P32043 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Hoxc5P32043 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
Hoxc5P32043 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Hoxc5P32043 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Hoxc5P32043 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
Hoxc5P32043 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxc5P32043 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxc5P32043 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxc5P32043 Notumos-201ENSMUST00000151998 2659 ntBASIC19.7■□□□□ 0.74
Hoxc5P32043 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.69■□□□□ 0.74
Hoxc5P32043 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Hoxc5P32043 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hoxc5P32043 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Hoxc5P32043 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hoxc5P32043 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hoxc5P32043 Gm14523-201ENSMUST00000117260 558 ntBASIC19.68■□□□□ 0.74
Hoxc5P32043 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hoxc5P32043 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms