Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tnfrsf9P20334 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC17.22■□□□□ 0.35
Tnfrsf9P20334 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC17.22■□□□□ 0.35
Tnfrsf9P20334 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tnfrsf9P20334 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tnfrsf9P20334 Gm4419-202ENSMUST00000226239 1431 ntBASIC17.21■□□□□ 0.35
Tnfrsf9P20334 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Tnfrsf9P20334 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tnfrsf9P20334 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tnfrsf9P20334 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tnfrsf9P20334 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Tnfrsf9P20334 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tnfrsf9P20334 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tnfrsf9P20334 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tnfrsf9P20334 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Tnfrsf9P20334 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
Tnfrsf9P20334 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Tnfrsf9P20334 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC17.21■□□□□ 0.34
Tnfrsf9P20334 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Tnfrsf9P20334 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC17.2■□□□□ 0.34
Tnfrsf9P20334 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC17.2■□□□□ 0.34
Tnfrsf9P20334 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Tnfrsf9P20334 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC17.2■□□□□ 0.34
Tnfrsf9P20334 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tnfrsf9P20334 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tnfrsf9P20334 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Tnfrsf9P20334 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Tnfrsf9P20334 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Tnfrsf9P20334 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Tnfrsf9P20334 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC17.2■□□□□ 0.34
Tnfrsf9P20334 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tnfrsf9P20334 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tnfrsf9P20334 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tnfrsf9P20334 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tnfrsf9P20334 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Tnfrsf9P20334 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Tnfrsf9P20334 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Tnfrsf9P20334 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tnfrsf9P20334 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Tnfrsf9P20334 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Tnfrsf9P20334 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tnfrsf9P20334 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Tnfrsf9P20334 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC17.17■□□□□ 0.34
Tnfrsf9P20334 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Tnfrsf9P20334 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
Tnfrsf9P20334 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tnfrsf9P20334 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tnfrsf9P20334 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC17.17■□□□□ 0.34
Tnfrsf9P20334 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Tnfrsf9P20334 Gm5131-201ENSMUST00000212776 1238 ntBASIC17.17■□□□□ 0.34
Tnfrsf9P20334 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tnfrsf9P20334 Gm43034-201ENSMUST00000198678 1364 ntBASIC17.16■□□□□ 0.34
Tnfrsf9P20334 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Tnfrsf9P20334 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfrsf9P20334 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfrsf9P20334 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfrsf9P20334 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfrsf9P20334 H3f3aos-201ENSMUST00000097448 2905 ntBASIC17.16■□□□□ 0.34
Tnfrsf9P20334 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfrsf9P20334 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfrsf9P20334 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC17.16■□□□□ 0.34
Tnfrsf9P20334 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfrsf9P20334 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfrsf9P20334 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfrsf9P20334 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfrsf9P20334 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfrsf9P20334 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfrsf9P20334 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC17.15■□□□□ 0.34
Tnfrsf9P20334 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC17.15■□□□□ 0.34
Tnfrsf9P20334 Gm7417-201ENSMUST00000192950 473 ntBASIC17.15■□□□□ 0.34
Tnfrsf9P20334 Gm13241-201ENSMUST00000094493 780 ntBASIC17.15■□□□□ 0.34
Tnfrsf9P20334 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tnfrsf9P20334 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Tnfrsf9P20334 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Tnfrsf9P20334 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tnfrsf9P20334 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tnfrsf9P20334 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tnfrsf9P20334 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC17.14■□□□□ 0.33
Tnfrsf9P20334 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tnfrsf9P20334 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Tnfrsf9P20334 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tnfrsf9P20334 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfrsf9P20334 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Tnfrsf9P20334 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfrsf9P20334 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfrsf9P20334 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfrsf9P20334 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC17.13■□□□□ 0.33
Tnfrsf9P20334 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfrsf9P20334 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Tnfrsf9P20334 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfrsf9P20334 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfrsf9P20334 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfrsf9P20334 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Tnfrsf9P20334 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Tnfrsf9P20334 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tnfrsf9P20334 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tnfrsf9P20334 AC124392.1-201ENSMUST00000225172 5324 ntBASIC17.12■□□□□ 0.33
Tnfrsf9P20334 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC17.12■□□□□ 0.33
Tnfrsf9P20334 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tnfrsf9P20334 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 12.6 ms