Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
P20040 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
P20040 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
P20040 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
P20040 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
P20040 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
P20040 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC18.95■□□□□ 0.62
P20040 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
P20040 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
P20040 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
P20040 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
P20040 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
P20040 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.93■□□□□ 0.62
P20040 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
P20040 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
P20040 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
P20040 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
P20040 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
P20040 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
P20040 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
P20040 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
P20040 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC18.92■□□□□ 0.62
P20040 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC18.92■□□□□ 0.62
P20040 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC18.92■□□□□ 0.62
P20040 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
P20040 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
P20040 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
P20040 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC18.91■□□□□ 0.62
P20040 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC18.91■□□□□ 0.62
P20040 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
P20040 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
P20040 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC18.91■□□□□ 0.62
P20040 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC18.9■□□□□ 0.62
P20040 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
P20040 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC18.9■□□□□ 0.62
P20040 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
P20040 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
P20040 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
P20040 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
P20040 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
P20040 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
P20040 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.9■□□□□ 0.62
P20040 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
P20040 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
P20040 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
P20040 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
P20040 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
P20040 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC18.89■□□□□ 0.61
P20040 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
P20040 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
P20040 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.89■□□□□ 0.61
P20040 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
P20040 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
P20040 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
P20040 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
P20040 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
P20040 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
P20040 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
P20040 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
P20040 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
P20040 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
P20040 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
P20040 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
P20040 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
P20040 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
P20040 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
P20040 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC18.86■□□□□ 0.61
P20040 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC18.86■□□□□ 0.61
P20040 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
P20040 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
P20040 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
P20040 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
P20040 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
P20040 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
P20040 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
P20040 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
P20040 AC164433.2-201ENSMUST00000226346 1701 ntBASIC18.84■□□□□ 0.61
P20040 AC117769.4-201ENSMUST00000225679 685 ntBASIC18.84■□□□□ 0.61
P20040 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
P20040 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.84■□□□□ 0.61
P20040 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.61
P20040 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
P20040 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
P20040 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
P20040 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
P20040 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC18.82■□□□□ 0.6
P20040 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
P20040 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
P20040 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
P20040 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
P20040 Notumos-201ENSMUST00000151998 2659 ntBASIC18.82■□□□□ 0.6
P20040 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
P20040 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
P20040 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
P20040 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
P20040 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
P20040 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
P20040 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
P20040 AC153524.1-201ENSMUST00000220436 1935 ntBASIC18.81■□□□□ 0.6
P20040 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms