Protein–RNA interactions for Protein: P08046

Egr1, Early growth response protein 1, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Egr1P08046 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Egr1P08046 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.39■□□□□ 0.85
Egr1P08046 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Egr1P08046 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Egr1P08046 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Egr1P08046 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Egr1P08046 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
Egr1P08046 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.38■□□□□ 0.85
Egr1P08046 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC20.37■□□□□ 0.85
Egr1P08046 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC20.37■□□□□ 0.85
Egr1P08046 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Egr1P08046 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
Egr1P08046 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Egr1P08046 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Egr1P08046 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.36■□□□□ 0.85
Egr1P08046 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Egr1P08046 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Egr1P08046 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Egr1P08046 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Egr1P08046 Gm43137-201ENSMUST00000198052 594 ntBASIC20.35■□□□□ 0.85
Egr1P08046 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.35■□□□□ 0.85
Egr1P08046 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Egr1P08046 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Egr1P08046 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Egr1P08046 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Egr1P08046 Gm26571-201ENSMUST00000181399 666 ntBASIC20.34■□□□□ 0.85
Egr1P08046 Mir7075-201ENSMUST00000184187 82 ntBASIC20.34■□□□□ 0.85
Egr1P08046 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Egr1P08046 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.34■□□□□ 0.85
Egr1P08046 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Egr1P08046 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Egr1P08046 AC153504.1-201ENSMUST00000218379 2290 ntBASIC20.33■□□□□ 0.85
Egr1P08046 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
Egr1P08046 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Egr1P08046 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Egr1P08046 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.33■□□□□ 0.84
Egr1P08046 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Egr1P08046 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Egr1P08046 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Egr1P08046 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Egr1P08046 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Egr1P08046 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Egr1P08046 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Egr1P08046 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Egr1P08046 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC20.31■□□□□ 0.84
Egr1P08046 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Egr1P08046 CT025689.6-201ENSMUST00000224991 1104 ntBASIC20.31■□□□□ 0.84
Egr1P08046 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Egr1P08046 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Egr1P08046 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Egr1P08046 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Egr1P08046 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Egr1P08046 Gm42569-201ENSMUST00000200539 472 ntBASIC20.3■□□□□ 0.84
Egr1P08046 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Egr1P08046 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Egr1P08046 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Egr1P08046 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Egr1P08046 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Egr1P08046 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Egr1P08046 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Egr1P08046 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Egr1P08046 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Egr1P08046 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Egr1P08046 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Egr1P08046 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Egr1P08046 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Egr1P08046 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Egr1P08046 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Egr1P08046 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Egr1P08046 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.27■□□□□ 0.84
Egr1P08046 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.27■□□□□ 0.84
Egr1P08046 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.27■□□□□ 0.84
Egr1P08046 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Egr1P08046 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Egr1P08046 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Egr1P08046 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.26■□□□□ 0.83
Egr1P08046 Gm27405-201ENSMUST00000184201 112 ntBASIC20.26■□□□□ 0.83
Egr1P08046 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC20.26■□□□□ 0.83
Egr1P08046 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Egr1P08046 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Egr1P08046 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Egr1P08046 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Egr1P08046 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Egr1P08046 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Egr1P08046 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Egr1P08046 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.25■□□□□ 0.83
Egr1P08046 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Egr1P08046 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Egr1P08046 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Egr1P08046 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Egr1P08046 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Egr1P08046 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Egr1P08046 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Egr1P08046 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Egr1P08046 Gm8493-201ENSMUST00000196881 489 ntBASIC20.23■□□□□ 0.83
Egr1P08046 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.23■□□□□ 0.83
Egr1P08046 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.23■□□□□ 0.83
Egr1P08046 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Egr1P08046 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Egr1P08046 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms