Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PrnpP04925 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PrnpP04925 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PrnpP04925 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
PrnpP04925 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
PrnpP04925 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PrnpP04925 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
PrnpP04925 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC22.53■■□□□ 1.2
PrnpP04925 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC22.53■■□□□ 1.2
PrnpP04925 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC22.53■■□□□ 1.2
PrnpP04925 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PrnpP04925 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PrnpP04925 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC22.52■■□□□ 1.2
PrnpP04925 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
PrnpP04925 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PrnpP04925 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PrnpP04925 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PrnpP04925 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC22.52■■□□□ 1.2
PrnpP04925 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC22.52■■□□□ 1.2
PrnpP04925 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC22.52■■□□□ 1.2
PrnpP04925 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PrnpP04925 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC22.51■■□□□ 1.19
PrnpP04925 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PrnpP04925 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PrnpP04925 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PrnpP04925 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PrnpP04925 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PrnpP04925 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PrnpP04925 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
PrnpP04925 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PrnpP04925 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC22.49■■□□□ 1.19
PrnpP04925 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
PrnpP04925 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PrnpP04925 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PrnpP04925 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
PrnpP04925 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
PrnpP04925 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
PrnpP04925 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC22.48■■□□□ 1.19
PrnpP04925 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
PrnpP04925 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PrnpP04925 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PrnpP04925 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PrnpP04925 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
PrnpP04925 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC22.47■■□□□ 1.19
PrnpP04925 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PrnpP04925 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
PrnpP04925 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
PrnpP04925 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
PrnpP04925 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC22.46■■□□□ 1.19
PrnpP04925 AC140930.3-201ENSMUST00000222935 274 ntBASIC22.46■■□□□ 1.19
PrnpP04925 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
PrnpP04925 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PrnpP04925 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PrnpP04925 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.19
PrnpP04925 Gm6934-201ENSMUST00000194780 1905 ntBASIC22.45■■□□□ 1.18
PrnpP04925 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC22.45■■□□□ 1.18
PrnpP04925 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC22.45■■□□□ 1.18
PrnpP04925 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
PrnpP04925 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC22.44■■□□□ 1.18
PrnpP04925 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PrnpP04925 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
PrnpP04925 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PrnpP04925 Appbp2os-202ENSMUST00000206972 447 ntBASIC22.44■■□□□ 1.18
PrnpP04925 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
PrnpP04925 Gm10620-201ENSMUST00000098379 1332 ntBASIC22.44■■□□□ 1.18
PrnpP04925 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PrnpP04925 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PrnpP04925 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
PrnpP04925 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PrnpP04925 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PrnpP04925 Gm12821-201ENSMUST00000120022 600 ntBASIC22.42■■□□□ 1.18
PrnpP04925 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PrnpP04925 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
PrnpP04925 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PrnpP04925 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC22.41■■□□□ 1.18
PrnpP04925 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
PrnpP04925 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PrnpP04925 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC22.41■■□□□ 1.18
PrnpP04925 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC22.41■■□□□ 1.18
PrnpP04925 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PrnpP04925 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PrnpP04925 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PrnpP04925 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
PrnpP04925 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PrnpP04925 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
PrnpP04925 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PrnpP04925 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
PrnpP04925 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PrnpP04925 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
PrnpP04925 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC22.39■■□□□ 1.18
PrnpP04925 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.18
PrnpP04925 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
PrnpP04925 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
PrnpP04925 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC22.39■■□□□ 1.17
PrnpP04925 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PrnpP04925 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC22.39■■□□□ 1.17
PrnpP04925 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
PrnpP04925 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC22.38■■□□□ 1.17
PrnpP04925 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC22.38■■□□□ 1.17
PrnpP04925 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC22.38■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms