Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
H3f3cP02301 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
H3f3cP02301 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
H3f3cP02301 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
H3f3cP02301 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
H3f3cP02301 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
H3f3cP02301 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
H3f3cP02301 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC18.32■□□□□ 0.52
H3f3cP02301 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
H3f3cP02301 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
H3f3cP02301 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
H3f3cP02301 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
H3f3cP02301 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
H3f3cP02301 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
H3f3cP02301 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
H3f3cP02301 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
H3f3cP02301 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
H3f3cP02301 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
H3f3cP02301 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
H3f3cP02301 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
H3f3cP02301 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
H3f3cP02301 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
H3f3cP02301 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
H3f3cP02301 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
H3f3cP02301 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
H3f3cP02301 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
H3f3cP02301 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
H3f3cP02301 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
H3f3cP02301 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
H3f3cP02301 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
H3f3cP02301 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
H3f3cP02301 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
H3f3cP02301 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
H3f3cP02301 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
H3f3cP02301 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
H3f3cP02301 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
H3f3cP02301 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
H3f3cP02301 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC18.28■□□□□ 0.52
H3f3cP02301 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC18.28■□□□□ 0.52
H3f3cP02301 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC18.28■□□□□ 0.52
H3f3cP02301 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
H3f3cP02301 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
H3f3cP02301 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
H3f3cP02301 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
H3f3cP02301 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
H3f3cP02301 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
H3f3cP02301 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
H3f3cP02301 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC18.27■□□□□ 0.52
H3f3cP02301 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
H3f3cP02301 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
H3f3cP02301 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
H3f3cP02301 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
H3f3cP02301 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
H3f3cP02301 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
H3f3cP02301 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
H3f3cP02301 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
H3f3cP02301 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
H3f3cP02301 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC18.26■□□□□ 0.51
H3f3cP02301 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC18.26■□□□□ 0.51
H3f3cP02301 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
H3f3cP02301 Gm5921-201ENSMUST00000075898 882 ntBASIC18.26■□□□□ 0.51
H3f3cP02301 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
H3f3cP02301 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC18.26■□□□□ 0.51
H3f3cP02301 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
H3f3cP02301 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
H3f3cP02301 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
H3f3cP02301 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
H3f3cP02301 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
H3f3cP02301 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC18.25■□□□□ 0.51
H3f3cP02301 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
H3f3cP02301 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
H3f3cP02301 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
H3f3cP02301 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
H3f3cP02301 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
H3f3cP02301 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
H3f3cP02301 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
H3f3cP02301 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.24■□□□□ 0.51
H3f3cP02301 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
H3f3cP02301 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC18.24■□□□□ 0.51
H3f3cP02301 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
H3f3cP02301 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
H3f3cP02301 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
H3f3cP02301 Nsd1-206ENSMUST00000224918 1001 ntBASIC18.23■□□□□ 0.51
H3f3cP02301 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
H3f3cP02301 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
H3f3cP02301 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
H3f3cP02301 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
H3f3cP02301 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC18.22■□□□□ 0.51
H3f3cP02301 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC18.22■□□□□ 0.51
H3f3cP02301 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC18.22■□□□□ 0.51
H3f3cP02301 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
H3f3cP02301 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
H3f3cP02301 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
H3f3cP02301 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
H3f3cP02301 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC18.21■□□□□ 0.51
H3f3cP02301 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
H3f3cP02301 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
H3f3cP02301 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
H3f3cP02301 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
H3f3cP02301 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms