Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Igh-VJ558P01758 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Igh-VJ558P01758 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Igh-VJ558P01758 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Igh-VJ558P01758 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.69■□□□□ 0.58
Igh-VJ558P01758 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.69■□□□□ 0.58
Igh-VJ558P01758 Gm37415-201ENSMUST00000192265 2054 ntBASIC18.69■□□□□ 0.58
Igh-VJ558P01758 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Igh-VJ558P01758 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Igh-VJ558P01758 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Igh-VJ558P01758 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Igh-VJ558P01758 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Igh-VJ558P01758 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC18.68■□□□□ 0.58
Igh-VJ558P01758 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Igh-VJ558P01758 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Igh-VJ558P01758 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Igh-VJ558P01758 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Igh-VJ558P01758 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC18.67■□□□□ 0.58
Igh-VJ558P01758 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC18.67■□□□□ 0.58
Igh-VJ558P01758 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Igh-VJ558P01758 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Igh-VJ558P01758 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC18.67■□□□□ 0.58
Igh-VJ558P01758 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Igh-VJ558P01758 Gm32051-202ENSMUST00000197905 2385 ntBASIC18.67■□□□□ 0.58
Igh-VJ558P01758 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Igh-VJ558P01758 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Igh-VJ558P01758 Gm42418-201ENSMUST00000182010 1831 ntBASIC18.66■□□□□ 0.58
Igh-VJ558P01758 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Igh-VJ558P01758 Gm43592-201ENSMUST00000196922 1165 ntBASIC18.66■□□□□ 0.58
Igh-VJ558P01758 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC18.66■□□□□ 0.58
Igh-VJ558P01758 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Igh-VJ558P01758 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Igh-VJ558P01758 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Igh-VJ558P01758 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Igh-VJ558P01758 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Igh-VJ558P01758 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Igh-VJ558P01758 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC18.65■□□□□ 0.58
Igh-VJ558P01758 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC18.65■□□□□ 0.58
Igh-VJ558P01758 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
Igh-VJ558P01758 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Igh-VJ558P01758 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Igh-VJ558P01758 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Igh-VJ558P01758 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC18.64■□□□□ 0.57
Igh-VJ558P01758 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Igh-VJ558P01758 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Igh-VJ558P01758 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Igh-VJ558P01758 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Igh-VJ558P01758 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Igh-VJ558P01758 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC18.63■□□□□ 0.57
Igh-VJ558P01758 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
Igh-VJ558P01758 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Igh-VJ558P01758 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC18.63■□□□□ 0.57
Igh-VJ558P01758 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Igh-VJ558P01758 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Igh-VJ558P01758 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Igh-VJ558P01758 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Igh-VJ558P01758 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.63■□□□□ 0.57
Igh-VJ558P01758 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Igh-VJ558P01758 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Igh-VJ558P01758 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Igh-VJ558P01758 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
Igh-VJ558P01758 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Igh-VJ558P01758 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC18.62■□□□□ 0.57
Igh-VJ558P01758 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Igh-VJ558P01758 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC18.62■□□□□ 0.57
Igh-VJ558P01758 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Igh-VJ558P01758 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Igh-VJ558P01758 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Igh-VJ558P01758 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Igh-VJ558P01758 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Igh-VJ558P01758 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Igh-VJ558P01758 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC18.61■□□□□ 0.57
Igh-VJ558P01758 Gm10420-201ENSMUST00000121713 882 ntBASIC18.61■□□□□ 0.57
Igh-VJ558P01758 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Igh-VJ558P01758 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Igh-VJ558P01758 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Igh-VJ558P01758 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
Igh-VJ558P01758 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Igh-VJ558P01758 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Igh-VJ558P01758 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Igh-VJ558P01758 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC18.6■□□□□ 0.57
Igh-VJ558P01758 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.6■□□□□ 0.57
Igh-VJ558P01758 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC18.6■□□□□ 0.57
Igh-VJ558P01758 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18.6■□□□□ 0.57
Igh-VJ558P01758 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
Igh-VJ558P01758 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Igh-VJ558P01758 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Igh-VJ558P01758 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC18.59■□□□□ 0.57
Igh-VJ558P01758 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Igh-VJ558P01758 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Igh-VJ558P01758 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Igh-VJ558P01758 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
Igh-VJ558P01758 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Igh-VJ558P01758 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
Igh-VJ558P01758 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC18.58■□□□□ 0.56
Igh-VJ558P01758 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Igh-VJ558P01758 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Igh-VJ558P01758 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Igh-VJ558P01758 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Igh-VJ558P01758 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms