Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC15.07■□□□□ 0
Sh2d1aO88890 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Sh2d1aO88890 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sh2d1aO88890 AC115037.1-201ENSMUST00000223391 2173 ntBASIC15.06■□□□□ 0
Sh2d1aO88890 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Sh2d1aO88890 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sh2d1aO88890 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Sh2d1aO88890 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC15.06■□□□□ 0
Sh2d1aO88890 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sh2d1aO88890 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Sh2d1aO88890 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sh2d1aO88890 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC15.05■□□□□ -0
Sh2d1aO88890 AC117245.4-201ENSMUST00000217388 1646 ntBASIC15.05■□□□□ -0
Sh2d1aO88890 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sh2d1aO88890 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
Sh2d1aO88890 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC15.04■□□□□ -0
Sh2d1aO88890 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sh2d1aO88890 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Sh2d1aO88890 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sh2d1aO88890 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sh2d1aO88890 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sh2d1aO88890 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sh2d1aO88890 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sh2d1aO88890 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sh2d1aO88890 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sh2d1aO88890 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sh2d1aO88890 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC15.03■□□□□ -0
Sh2d1aO88890 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC15.03■□□□□ -0
Sh2d1aO88890 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
Sh2d1aO88890 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Sh2d1aO88890 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC15.03■□□□□ -0
Sh2d1aO88890 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC15.03■□□□□ -0
Sh2d1aO88890 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sh2d1aO88890 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sh2d1aO88890 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sh2d1aO88890 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
Sh2d1aO88890 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sh2d1aO88890 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sh2d1aO88890 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC15.02■□□□□ -0
Sh2d1aO88890 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC15.02■□□□□ -0
Sh2d1aO88890 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sh2d1aO88890 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sh2d1aO88890 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Sh2d1aO88890 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sh2d1aO88890 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sh2d1aO88890 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sh2d1aO88890 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC15.02■□□□□ -0
Sh2d1aO88890 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sh2d1aO88890 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sh2d1aO88890 Gm26766-202ENSMUST00000227544 2347 ntBASIC15.01□□□□□ -0.01
Sh2d1aO88890 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Sh2d1aO88890 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sh2d1aO88890 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC15.01□□□□□ -0.01
Sh2d1aO88890 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sh2d1aO88890 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Sh2d1aO88890 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sh2d1aO88890 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sh2d1aO88890 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC15.01□□□□□ -0.01
Sh2d1aO88890 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Sh2d1aO88890 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sh2d1aO88890 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Sh2d1aO88890 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Sh2d1aO88890 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Sh2d1aO88890 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC15□□□□□ -0.01
Sh2d1aO88890 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sh2d1aO88890 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Sh2d1aO88890 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Sh2d1aO88890 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Sh2d1aO88890 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sh2d1aO88890 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC14.99□□□□□ -0.01
Sh2d1aO88890 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Sh2d1aO88890 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sh2d1aO88890 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sh2d1aO88890 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC14.99□□□□□ -0.01
Sh2d1aO88890 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC14.99□□□□□ -0.01
Sh2d1aO88890 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sh2d1aO88890 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC14.98□□□□□ -0.01
Sh2d1aO88890 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Sh2d1aO88890 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Sh2d1aO88890 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sh2d1aO88890 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Sh2d1aO88890 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sh2d1aO88890 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sh2d1aO88890 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Sh2d1aO88890 Gm22567-201ENSMUST00000175542 342 ntBASIC14.98□□□□□ -0.01
Sh2d1aO88890 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC14.98□□□□□ -0.01
Sh2d1aO88890 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Sh2d1aO88890 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sh2d1aO88890 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sh2d1aO88890 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Sh2d1aO88890 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sh2d1aO88890 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Sh2d1aO88890 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Sh2d1aO88890 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sh2d1aO88890 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Sh2d1aO88890 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sh2d1aO88890 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Sh2d1aO88890 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sh2d1aO88890 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Sh2d1aO88890 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms