Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cacna1hO88427 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
Cacna1hO88427 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.53■■□□□ 1.04
Cacna1hO88427 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC21.53■■□□□ 1.04
Cacna1hO88427 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC21.53■■□□□ 1.04
Cacna1hO88427 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC21.53■■□□□ 1.04
Cacna1hO88427 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cacna1hO88427 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cacna1hO88427 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cacna1hO88427 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cacna1hO88427 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC21.52■■□□□ 1.04
Cacna1hO88427 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Cacna1hO88427 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cacna1hO88427 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cacna1hO88427 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cacna1hO88427 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
Cacna1hO88427 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC21.52■■□□□ 1.04
Cacna1hO88427 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
Cacna1hO88427 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cacna1hO88427 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cacna1hO88427 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Cacna1hO88427 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Cacna1hO88427 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cacna1hO88427 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cacna1hO88427 Gm37179-201ENSMUST00000194862 823 ntBASIC21.5■■□□□ 1.03
Cacna1hO88427 Gm43137-201ENSMUST00000198052 594 ntBASIC21.5■■□□□ 1.03
Cacna1hO88427 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cacna1hO88427 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cacna1hO88427 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cacna1hO88427 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Cacna1hO88427 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cacna1hO88427 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Cacna1hO88427 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Cacna1hO88427 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.49■■□□□ 1.03
Cacna1hO88427 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Cacna1hO88427 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Cacna1hO88427 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Cacna1hO88427 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC21.49■■□□□ 1.03
Cacna1hO88427 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Cacna1hO88427 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Cacna1hO88427 Gm12669-201ENSMUST00000122162 1009 ntBASIC21.48■■□□□ 1.03
Cacna1hO88427 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Cacna1hO88427 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Cacna1hO88427 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC21.47■■□□□ 1.03
Cacna1hO88427 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Cacna1hO88427 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC21.47■■□□□ 1.03
Cacna1hO88427 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC21.47■■□□□ 1.03
Cacna1hO88427 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Cacna1hO88427 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Cacna1hO88427 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Cacna1hO88427 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC21.46■■□□□ 1.03
Cacna1hO88427 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
Cacna1hO88427 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Cacna1hO88427 Gm8093-201ENSMUST00000128935 1892 ntBASIC21.46■■□□□ 1.03
Cacna1hO88427 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Cacna1hO88427 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Cacna1hO88427 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Cacna1hO88427 Gm43017-201ENSMUST00000198296 752 ntBASIC21.46■■□□□ 1.03
Cacna1hO88427 Gm9207-201ENSMUST00000198773 1115 ntBASIC21.46■■□□□ 1.03
Cacna1hO88427 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Cacna1hO88427 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.03
Cacna1hO88427 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.45■■□□□ 1.03
Cacna1hO88427 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Cacna1hO88427 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Cacna1hO88427 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Cacna1hO88427 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cacna1hO88427 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Cacna1hO88427 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Cacna1hO88427 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cacna1hO88427 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cacna1hO88427 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cacna1hO88427 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.44■■□□□ 1.02
Cacna1hO88427 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cacna1hO88427 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cacna1hO88427 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Cacna1hO88427 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cacna1hO88427 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cacna1hO88427 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cacna1hO88427 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
Cacna1hO88427 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Cacna1hO88427 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC21.43■■□□□ 1.02
Cacna1hO88427 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cacna1hO88427 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Cacna1hO88427 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cacna1hO88427 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Cacna1hO88427 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cacna1hO88427 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cacna1hO88427 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cacna1hO88427 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cacna1hO88427 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cacna1hO88427 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Cacna1hO88427 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cacna1hO88427 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cacna1hO88427 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Cacna1hO88427 Gm42569-201ENSMUST00000200539 472 ntBASIC21.41■■□□□ 1.02
Cacna1hO88427 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cacna1hO88427 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cacna1hO88427 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cacna1hO88427 Wdr70-203ENSMUST00000227371 1130 ntBASIC21.4■■□□□ 1.02
Cacna1hO88427 Gm10493-201ENSMUST00000097270 612 ntBASIC21.4■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms