Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Rdh5O55240 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rdh5O55240 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Rdh5O55240 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rdh5O55240 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
Rdh5O55240 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rdh5O55240 Gm10420-201ENSMUST00000121713 882 ntBASIC20.31■□□□□ 0.84
Rdh5O55240 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.31■□□□□ 0.84
Rdh5O55240 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.31■□□□□ 0.84
Rdh5O55240 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Rdh5O55240 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rdh5O55240 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rdh5O55240 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.3■□□□□ 0.84
Rdh5O55240 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.3■□□□□ 0.84
Rdh5O55240 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Rdh5O55240 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Rdh5O55240 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rdh5O55240 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Rdh5O55240 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.29■□□□□ 0.84
Rdh5O55240 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rdh5O55240 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Rdh5O55240 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rdh5O55240 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rdh5O55240 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
Rdh5O55240 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rdh5O55240 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rdh5O55240 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.28■□□□□ 0.84
Rdh5O55240 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rdh5O55240 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Rdh5O55240 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rdh5O55240 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rdh5O55240 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.28■□□□□ 0.84
Rdh5O55240 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Rdh5O55240 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Rdh5O55240 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.27■□□□□ 0.84
Rdh5O55240 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rdh5O55240 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rdh5O55240 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rdh5O55240 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Rdh5O55240 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.27■□□□□ 0.83
Rdh5O55240 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rdh5O55240 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rdh5O55240 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.26■□□□□ 0.83
Rdh5O55240 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.26■□□□□ 0.83
Rdh5O55240 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Rdh5O55240 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rdh5O55240 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.25■□□□□ 0.83
Rdh5O55240 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rdh5O55240 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rdh5O55240 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Rdh5O55240 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.25■□□□□ 0.83
Rdh5O55240 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rdh5O55240 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rdh5O55240 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Rdh5O55240 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rdh5O55240 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rdh5O55240 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rdh5O55240 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rdh5O55240 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rdh5O55240 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rdh5O55240 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rdh5O55240 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rdh5O55240 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.23■□□□□ 0.83
Rdh5O55240 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rdh5O55240 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.23■□□□□ 0.83
Rdh5O55240 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.23■□□□□ 0.83
Rdh5O55240 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rdh5O55240 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rdh5O55240 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rdh5O55240 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rdh5O55240 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rdh5O55240 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.22■□□□□ 0.83
Rdh5O55240 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rdh5O55240 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Rdh5O55240 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Rdh5O55240 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Rdh5O55240 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rdh5O55240 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rdh5O55240 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rdh5O55240 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rdh5O55240 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rdh5O55240 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rdh5O55240 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.2■□□□□ 0.82
Rdh5O55240 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.2■□□□□ 0.82
Rdh5O55240 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Rdh5O55240 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Rdh5O55240 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rdh5O55240 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rdh5O55240 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Rdh5O55240 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.19■□□□□ 0.82
Rdh5O55240 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rdh5O55240 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rdh5O55240 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rdh5O55240 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rdh5O55240 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Rdh5O55240 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Rdh5O55240 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Rdh5O55240 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rdh5O55240 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.19■□□□□ 0.82
Rdh5O55240 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms