Protein–RNA interactions for Protein: O35683

Ndufa1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, mousemouse

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufa1O35683 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ndufa1O35683 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ndufa1O35683 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ndufa1O35683 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ndufa1O35683 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ndufa1O35683 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ndufa1O35683 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ndufa1O35683 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ndufa1O35683 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Ndufa1O35683 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ndufa1O35683 Gm4430-201ENSMUST00000192413 1943 ntBASIC15.31■□□□□ 0.04
Ndufa1O35683 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ndufa1O35683 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC15.31■□□□□ 0.04
Ndufa1O35683 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Ndufa1O35683 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ndufa1O35683 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ndufa1O35683 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ndufa1O35683 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ndufa1O35683 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ndufa1O35683 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ndufa1O35683 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ndufa1O35683 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ndufa1O35683 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ndufa1O35683 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ndufa1O35683 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ndufa1O35683 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC15.29■□□□□ 0.04
Ndufa1O35683 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Ndufa1O35683 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ndufa1O35683 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ndufa1O35683 Gm8503-201ENSMUST00000118131 455 ntBASIC15.29■□□□□ 0.04
Ndufa1O35683 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC15.29■□□□□ 0.04
Ndufa1O35683 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ndufa1O35683 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Ndufa1O35683 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ndufa1O35683 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ndufa1O35683 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ndufa1O35683 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ndufa1O35683 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC15.28■□□□□ 0.04
Ndufa1O35683 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ndufa1O35683 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ndufa1O35683 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ndufa1O35683 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ndufa1O35683 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ndufa1O35683 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ndufa1O35683 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
Ndufa1O35683 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ndufa1O35683 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ndufa1O35683 Gm37136-201ENSMUST00000194368 194 ntBASIC15.26■□□□□ 0.03
Ndufa1O35683 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ndufa1O35683 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ndufa1O35683 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ndufa1O35683 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ndufa1O35683 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ndufa1O35683 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ndufa1O35683 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ndufa1O35683 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Ndufa1O35683 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ndufa1O35683 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ndufa1O35683 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Ndufa1O35683 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ndufa1O35683 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
Ndufa1O35683 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Ndufa1O35683 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ndufa1O35683 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ndufa1O35683 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ndufa1O35683 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ndufa1O35683 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ndufa1O35683 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Ndufa1O35683 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ndufa1O35683 AC131739.1-201ENSMUST00000221692 1245 ntBASIC15.24■□□□□ 0.03
Ndufa1O35683 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ndufa1O35683 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC15.24■□□□□ 0.03
Ndufa1O35683 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC15.24■□□□□ 0.03
Ndufa1O35683 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Ndufa1O35683 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Ndufa1O35683 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ndufa1O35683 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ndufa1O35683 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC15.23■□□□□ 0.03
Ndufa1O35683 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Ndufa1O35683 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ndufa1O35683 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ndufa1O35683 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ndufa1O35683 AC115037.1-201ENSMUST00000223391 2173 ntBASIC15.22■□□□□ 0.03
Ndufa1O35683 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ndufa1O35683 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Ndufa1O35683 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ndufa1O35683 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ndufa1O35683 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ndufa1O35683 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
Ndufa1O35683 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ndufa1O35683 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ndufa1O35683 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ndufa1O35683 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ndufa1O35683 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC15.21■□□□□ 0.03
Ndufa1O35683 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.03
Ndufa1O35683 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC15.21■□□□□ 0.03
Ndufa1O35683 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC15.21■□□□□ 0.03
Ndufa1O35683 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
Ndufa1O35683 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ndufa1O35683 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 14 ms