Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Npc1O35604 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Npc1O35604 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Npc1O35604 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Npc1O35604 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Npc1O35604 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Npc1O35604 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Npc1O35604 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Npc1O35604 Gm15546-201ENSMUST00000122095 826 ntBASIC20.9■□□□□ 0.94
Npc1O35604 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Npc1O35604 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Npc1O35604 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Npc1O35604 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Npc1O35604 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Npc1O35604 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
Npc1O35604 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Npc1O35604 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Npc1O35604 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.89■□□□□ 0.93
Npc1O35604 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.89■□□□□ 0.93
Npc1O35604 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Npc1O35604 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Npc1O35604 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Npc1O35604 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Npc1O35604 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Npc1O35604 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.88■□□□□ 0.93
Npc1O35604 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Npc1O35604 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Npc1O35604 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Npc1O35604 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.88■□□□□ 0.93
Npc1O35604 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Npc1O35604 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Npc1O35604 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.87■□□□□ 0.93
Npc1O35604 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.87■□□□□ 0.93
Npc1O35604 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Npc1O35604 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.87■□□□□ 0.93
Npc1O35604 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.87■□□□□ 0.93
Npc1O35604 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Npc1O35604 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Npc1O35604 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Npc1O35604 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.86■□□□□ 0.93
Npc1O35604 Gm22567-201ENSMUST00000175542 342 ntBASIC20.86■□□□□ 0.93
Npc1O35604 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.86■□□□□ 0.93
Npc1O35604 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Npc1O35604 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Npc1O35604 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Npc1O35604 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Npc1O35604 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Npc1O35604 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.85■□□□□ 0.93
Npc1O35604 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Npc1O35604 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Npc1O35604 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Npc1O35604 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Npc1O35604 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Npc1O35604 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Npc1O35604 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Npc1O35604 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.84■□□□□ 0.93
Npc1O35604 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.84■□□□□ 0.93
Npc1O35604 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.84■□□□□ 0.93
Npc1O35604 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Npc1O35604 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Npc1O35604 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Npc1O35604 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Npc1O35604 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.83■□□□□ 0.93
Npc1O35604 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Npc1O35604 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Npc1O35604 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Npc1O35604 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.82■□□□□ 0.92
Npc1O35604 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.82■□□□□ 0.92
Npc1O35604 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Npc1O35604 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Npc1O35604 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.82■□□□□ 0.92
Npc1O35604 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Npc1O35604 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Npc1O35604 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.81■□□□□ 0.92
Npc1O35604 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Npc1O35604 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Npc1O35604 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Npc1O35604 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Npc1O35604 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Npc1O35604 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Npc1O35604 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Npc1O35604 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Npc1O35604 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Npc1O35604 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Npc1O35604 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Npc1O35604 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Npc1O35604 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Npc1O35604 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Npc1O35604 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Npc1O35604 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Npc1O35604 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.79■□□□□ 0.92
Npc1O35604 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Npc1O35604 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Npc1O35604 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.78■□□□□ 0.92
Npc1O35604 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.78■□□□□ 0.92
Npc1O35604 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Npc1O35604 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.78■□□□□ 0.92
Npc1O35604 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Npc1O35604 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.78■□□□□ 0.92
Npc1O35604 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms