Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC28.19■■■□□ 2.1
Col15a1O35206 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Col15a1O35206 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
Col15a1O35206 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Col15a1O35206 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Col15a1O35206 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC28.17■■■□□ 2.1
Col15a1O35206 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC28.17■■■□□ 2.1
Col15a1O35206 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC28.17■■■□□ 2.1
Col15a1O35206 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Col15a1O35206 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Col15a1O35206 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Col15a1O35206 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Col15a1O35206 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Col15a1O35206 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC28.16■■■□□ 2.1
Col15a1O35206 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC28.16■■■□□ 2.1
Col15a1O35206 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Col15a1O35206 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC28.16■■■□□ 2.1
Col15a1O35206 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC28.15■■■□□ 2.1
Col15a1O35206 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC28.15■■■□□ 2.1
Col15a1O35206 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC28.15■■■□□ 2.1
Col15a1O35206 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Col15a1O35206 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Col15a1O35206 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
Col15a1O35206 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Col15a1O35206 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Col15a1O35206 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Col15a1O35206 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC28.14■■■□□ 2.1
Col15a1O35206 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Col15a1O35206 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC28.13■■■□□ 2.09
Col15a1O35206 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC28.13■■■□□ 2.09
Col15a1O35206 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC28.13■■■□□ 2.09
Col15a1O35206 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
Col15a1O35206 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Col15a1O35206 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC28.12■■■□□ 2.09
Col15a1O35206 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Col15a1O35206 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC28.12■■■□□ 2.09
Col15a1O35206 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Col15a1O35206 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
Col15a1O35206 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
Col15a1O35206 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Col15a1O35206 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC28.11■■■□□ 2.09
Col15a1O35206 Appbp2os-202ENSMUST00000206972 447 ntBASIC28.11■■■□□ 2.09
Col15a1O35206 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
Col15a1O35206 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Col15a1O35206 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC28.1■■■□□ 2.09
Col15a1O35206 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
Col15a1O35206 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Col15a1O35206 Gm10620-201ENSMUST00000098379 1332 ntBASIC28.1■■■□□ 2.09
Col15a1O35206 Gm27454-201ENSMUST00000185090 204 ntBASIC28.1■■■□□ 2.09
Col15a1O35206 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Col15a1O35206 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Col15a1O35206 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC28.09■■■□□ 2.09
Col15a1O35206 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
Col15a1O35206 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC28.09■■■□□ 2.09
Col15a1O35206 Golgb1-201ENSMUST00000023534 498 ntBASIC28.09■■■□□ 2.09
Col15a1O35206 Gm6934-201ENSMUST00000194780 1905 ntBASIC28.09■■■□□ 2.09
Col15a1O35206 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Col15a1O35206 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC28.08■■■□□ 2.09
Col15a1O35206 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Col15a1O35206 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC28.07■■■□□ 2.08
Col15a1O35206 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC28.07■■■□□ 2.08
Col15a1O35206 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC28.07■■■□□ 2.08
Col15a1O35206 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC28.07■■■□□ 2.08
Col15a1O35206 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Col15a1O35206 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Col15a1O35206 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
Col15a1O35206 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC28.06■■■□□ 2.08
Col15a1O35206 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
Col15a1O35206 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Col15a1O35206 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Col15a1O35206 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Col15a1O35206 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC28.04■■■□□ 2.08
Col15a1O35206 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
Col15a1O35206 Serp2-204ENSMUST00000228055 705 ntBASIC28.04■■■□□ 2.08
Col15a1O35206 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC28.04■■■□□ 2.08
Col15a1O35206 Gm12821-201ENSMUST00000120022 600 ntBASIC28.03■■■□□ 2.08
Col15a1O35206 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC28.03■■■□□ 2.08
Col15a1O35206 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC28.03■■■□□ 2.08
Col15a1O35206 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC28.03■■■□□ 2.08
Col15a1O35206 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Col15a1O35206 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC28.03■■■□□ 2.08
Col15a1O35206 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC28.02■■■□□ 2.08
Col15a1O35206 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC28.02■■■□□ 2.08
Col15a1O35206 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC28.02■■■□□ 2.08
Col15a1O35206 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC28.02■■■□□ 2.08
Col15a1O35206 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.08
Col15a1O35206 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Col15a1O35206 Gm45417-201ENSMUST00000209533 758 ntBASIC28.01■■■□□ 2.07
Col15a1O35206 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Col15a1O35206 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Col15a1O35206 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC28■■■□□ 2.07
Col15a1O35206 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC28■■■□□ 2.07
Col15a1O35206 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC28■■■□□ 2.07
Col15a1O35206 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC28■■■□□ 2.07
Col15a1O35206 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Col15a1O35206 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
Col15a1O35206 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC27.99■■■□□ 2.07
Col15a1O35206 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
Col15a1O35206 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC27.98■■■□□ 2.07
Col15a1O35206 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC27.98■■■□□ 2.07
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms