Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Trove2O08848 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Trove2O08848 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Trove2O08848 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trove2O08848 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trove2O08848 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trove2O08848 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Trove2O08848 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trove2O08848 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trove2O08848 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trove2O08848 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.8■■□□□ 1.08
Trove2O08848 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Trove2O08848 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trove2O08848 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trove2O08848 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Trove2O08848 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trove2O08848 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trove2O08848 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trove2O08848 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trove2O08848 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Trove2O08848 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trove2O08848 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trove2O08848 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Trove2O08848 Terc-201ENSMUST00000082862 423 ntBASIC21.78■■□□□ 1.08
Trove2O08848 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trove2O08848 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Trove2O08848 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.78■■□□□ 1.08
Trove2O08848 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trove2O08848 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trove2O08848 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Trove2O08848 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.77■■□□□ 1.08
Trove2O08848 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC21.77■■□□□ 1.08
Trove2O08848 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trove2O08848 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.76■■□□□ 1.07
Trove2O08848 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trove2O08848 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Trove2O08848 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trove2O08848 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trove2O08848 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trove2O08848 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.76■■□□□ 1.07
Trove2O08848 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.76■■□□□ 1.07
Trove2O08848 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC21.76■■□□□ 1.07
Trove2O08848 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trove2O08848 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Trove2O08848 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC21.76■■□□□ 1.07
Trove2O08848 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.76■■□□□ 1.07
Trove2O08848 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trove2O08848 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trove2O08848 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trove2O08848 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trove2O08848 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trove2O08848 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trove2O08848 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trove2O08848 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Trove2O08848 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trove2O08848 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
Trove2O08848 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trove2O08848 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Trove2O08848 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Trove2O08848 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Trove2O08848 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Trove2O08848 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Trove2O08848 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.73■■□□□ 1.07
Trove2O08848 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.72■■□□□ 1.07
Trove2O08848 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trove2O08848 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Trove2O08848 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.72■■□□□ 1.07
Trove2O08848 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Trove2O08848 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trove2O08848 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trove2O08848 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
Trove2O08848 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trove2O08848 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Trove2O08848 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Trove2O08848 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.71■■□□□ 1.07
Trove2O08848 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trove2O08848 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Trove2O08848 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trove2O08848 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trove2O08848 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trove2O08848 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.07
Trove2O08848 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
Trove2O08848 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trove2O08848 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Trove2O08848 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trove2O08848 Hsf1-207ENSMUST00000228371 2102 ntBASIC21.7■■□□□ 1.06
Trove2O08848 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trove2O08848 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trove2O08848 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trove2O08848 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trove2O08848 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Trove2O08848 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC21.69■■□□□ 1.06
Trove2O08848 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trove2O08848 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trove2O08848 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trove2O08848 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trove2O08848 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Trove2O08848 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trove2O08848 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trove2O08848 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms