Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.83■■□□□ 1.09
Tnfrsf11bO08712 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Tnfrsf11bO08712 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Tnfrsf11bO08712 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Tnfrsf11bO08712 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Tnfrsf11bO08712 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Tnfrsf11bO08712 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Tnfrsf11bO08712 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Tnfrsf11bO08712 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Tnfrsf11bO08712 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Tnfrsf11bO08712 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Tnfrsf11bO08712 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Tnfrsf11bO08712 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.81■■□□□ 1.08
Tnfrsf11bO08712 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Tnfrsf11bO08712 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Tnfrsf11bO08712 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
Tnfrsf11bO08712 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Tnfrsf11bO08712 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC21.8■■□□□ 1.08
Tnfrsf11bO08712 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Tnfrsf11bO08712 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Tnfrsf11bO08712 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Tnfrsf11bO08712 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Tnfrsf11bO08712 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Tnfrsf11bO08712 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Tnfrsf11bO08712 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Tnfrsf11bO08712 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Tnfrsf11bO08712 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC21.78■■□□□ 1.08
Tnfrsf11bO08712 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Tnfrsf11bO08712 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Tnfrsf11bO08712 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.78■■□□□ 1.08
Tnfrsf11bO08712 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Tnfrsf11bO08712 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Tnfrsf11bO08712 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21.77■■□□□ 1.08
Tnfrsf11bO08712 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC21.77■■□□□ 1.08
Tnfrsf11bO08712 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Tnfrsf11bO08712 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Tnfrsf11bO08712 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Tnfrsf11bO08712 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Tnfrsf11bO08712 Gm42418-201ENSMUST00000182010 1831 ntBASIC21.77■■□□□ 1.08
Tnfrsf11bO08712 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC21.76■■□□□ 1.07
Tnfrsf11bO08712 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
Tnfrsf11bO08712 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Tnfrsf11bO08712 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Tnfrsf11bO08712 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.75■■□□□ 1.07
Tnfrsf11bO08712 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Tnfrsf11bO08712 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC21.75■■□□□ 1.07
Tnfrsf11bO08712 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Tnfrsf11bO08712 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Tnfrsf11bO08712 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Tnfrsf11bO08712 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Tnfrsf11bO08712 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Tnfrsf11bO08712 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Tnfrsf11bO08712 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Tnfrsf11bO08712 Gm27502-201ENSMUST00000183495 199 ntBASIC21.74■■□□□ 1.07
Tnfrsf11bO08712 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC21.74■■□□□ 1.07
Tnfrsf11bO08712 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
Tnfrsf11bO08712 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Tnfrsf11bO08712 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Tnfrsf11bO08712 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Tnfrsf11bO08712 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Tnfrsf11bO08712 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Tnfrsf11bO08712 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Tnfrsf11bO08712 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Tnfrsf11bO08712 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Tnfrsf11bO08712 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Tnfrsf11bO08712 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Tnfrsf11bO08712 Gm11175-201ENSMUST00000116172 543 ntBASIC21.72■■□□□ 1.07
Tnfrsf11bO08712 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Tnfrsf11bO08712 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Tnfrsf11bO08712 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Tnfrsf11bO08712 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Tnfrsf11bO08712 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Tnfrsf11bO08712 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Tnfrsf11bO08712 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Tnfrsf11bO08712 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.71■■□□□ 1.07
Tnfrsf11bO08712 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.71■■□□□ 1.07
Tnfrsf11bO08712 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Tnfrsf11bO08712 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Tnfrsf11bO08712 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Tnfrsf11bO08712 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC21.71■■□□□ 1.07
Tnfrsf11bO08712 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Tnfrsf11bO08712 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.7■■□□□ 1.07
Tnfrsf11bO08712 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Tnfrsf11bO08712 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Tnfrsf11bO08712 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.7■■□□□ 1.06
Tnfrsf11bO08712 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Tnfrsf11bO08712 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Tnfrsf11bO08712 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Tnfrsf11bO08712 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Tnfrsf11bO08712 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Tnfrsf11bO08712 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Tnfrsf11bO08712 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Tnfrsf11bO08712 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Tnfrsf11bO08712 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Tnfrsf11bO08712 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21.68■■□□□ 1.06
Tnfrsf11bO08712 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Tnfrsf11bO08712 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Tnfrsf11bO08712 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Tnfrsf11bO08712 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Tnfrsf11bO08712 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms