Protein–RNA interactions for Protein: O08583

Alyref, THO complex subunit 4, mousemouse

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AlyrefO08583 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
AlyrefO08583 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
AlyrefO08583 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
AlyrefO08583 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
AlyrefO08583 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
AlyrefO08583 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC21.77■■□□□ 1.08
AlyrefO08583 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
AlyrefO08583 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
AlyrefO08583 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
AlyrefO08583 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
AlyrefO08583 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
AlyrefO08583 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
AlyrefO08583 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
AlyrefO08583 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC21.76■■□□□ 1.07
AlyrefO08583 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
AlyrefO08583 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC21.76■■□□□ 1.07
AlyrefO08583 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC21.76■■□□□ 1.07
AlyrefO08583 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
AlyrefO08583 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
AlyrefO08583 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
AlyrefO08583 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
AlyrefO08583 Gm27405-201ENSMUST00000184201 112 ntBASIC21.75■■□□□ 1.07
AlyrefO08583 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
AlyrefO08583 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
AlyrefO08583 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
AlyrefO08583 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
AlyrefO08583 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.74■■□□□ 1.07
AlyrefO08583 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
AlyrefO08583 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
AlyrefO08583 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
AlyrefO08583 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
AlyrefO08583 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
AlyrefO08583 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
AlyrefO08583 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
AlyrefO08583 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC21.72■■□□□ 1.07
AlyrefO08583 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
AlyrefO08583 Gm42569-201ENSMUST00000200539 472 ntBASIC21.72■■□□□ 1.07
AlyrefO08583 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
AlyrefO08583 Spcs1-204ENSMUST00000226782 949 ntBASIC21.72■■□□□ 1.07
AlyrefO08583 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
AlyrefO08583 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
AlyrefO08583 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC21.72■■□□□ 1.07
AlyrefO08583 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC21.71■■□□□ 1.07
AlyrefO08583 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
AlyrefO08583 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
AlyrefO08583 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
AlyrefO08583 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
AlyrefO08583 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
AlyrefO08583 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
AlyrefO08583 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.7■■□□□ 1.06
AlyrefO08583 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
AlyrefO08583 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
AlyrefO08583 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
AlyrefO08583 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC21.7■■□□□ 1.06
AlyrefO08583 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
AlyrefO08583 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
AlyrefO08583 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
AlyrefO08583 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
AlyrefO08583 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
AlyrefO08583 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
AlyrefO08583 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
AlyrefO08583 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
AlyrefO08583 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
AlyrefO08583 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
AlyrefO08583 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
AlyrefO08583 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
AlyrefO08583 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
AlyrefO08583 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
AlyrefO08583 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC21.68■■□□□ 1.06
AlyrefO08583 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC21.68■■□□□ 1.06
AlyrefO08583 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
AlyrefO08583 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
AlyrefO08583 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
AlyrefO08583 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
AlyrefO08583 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
AlyrefO08583 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
AlyrefO08583 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC21.67■■□□□ 1.06
AlyrefO08583 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
AlyrefO08583 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
AlyrefO08583 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC21.66■■□□□ 1.06
AlyrefO08583 Gm43017-201ENSMUST00000198296 752 ntBASIC21.66■■□□□ 1.06
AlyrefO08583 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
AlyrefO08583 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
AlyrefO08583 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
AlyrefO08583 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
AlyrefO08583 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
AlyrefO08583 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.65■■□□□ 1.06
AlyrefO08583 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
AlyrefO08583 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
AlyrefO08583 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
AlyrefO08583 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
AlyrefO08583 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
AlyrefO08583 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
AlyrefO08583 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.65■■□□□ 1.06
AlyrefO08583 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.06
AlyrefO08583 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
AlyrefO08583 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC21.64■■□□□ 1.05
AlyrefO08583 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
AlyrefO08583 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
AlyrefO08583 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms