Protein–RNA interactions for Protein: J3QPL3

Gm5225, Predicted gene 5225, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5225J3QPL3 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm5225J3QPL3 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm5225J3QPL3 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC18.83■□□□□ 0.61
Gm5225J3QPL3 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Gm5225J3QPL3 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Gm5225J3QPL3 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC18.83■□□□□ 0.6
Gm5225J3QPL3 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Gm5225J3QPL3 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Gm5225J3QPL3 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Gm5225J3QPL3 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm5225J3QPL3 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm5225J3QPL3 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm5225J3QPL3 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm5225J3QPL3 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm5225J3QPL3 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Gm5225J3QPL3 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm5225J3QPL3 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm5225J3QPL3 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC18.81■□□□□ 0.6
Gm5225J3QPL3 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm5225J3QPL3 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.81■□□□□ 0.6
Gm5225J3QPL3 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm5225J3QPL3 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm5225J3QPL3 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm5225J3QPL3 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Gm5225J3QPL3 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm5225J3QPL3 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.8■□□□□ 0.6
Gm5225J3QPL3 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm5225J3QPL3 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm5225J3QPL3 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Gm5225J3QPL3 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm5225J3QPL3 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC18.8■□□□□ 0.6
Gm5225J3QPL3 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC18.8■□□□□ 0.6
Gm5225J3QPL3 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Gm5225J3QPL3 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm5225J3QPL3 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm5225J3QPL3 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Gm5225J3QPL3 Gm5067-201ENSMUST00000170449 1009 ntBASIC18.79■□□□□ 0.6
Gm5225J3QPL3 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm5225J3QPL3 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Gm5225J3QPL3 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC18.79■□□□□ 0.6
Gm5225J3QPL3 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Gm5225J3QPL3 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm5225J3QPL3 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Gm5225J3QPL3 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Gm5225J3QPL3 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Gm5225J3QPL3 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC18.78■□□□□ 0.6
Gm5225J3QPL3 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm5225J3QPL3 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
Gm5225J3QPL3 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC18.78■□□□□ 0.6
Gm5225J3QPL3 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm5225J3QPL3 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Gm5225J3QPL3 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC18.78■□□□□ 0.6
Gm5225J3QPL3 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm5225J3QPL3 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Gm5225J3QPL3 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Gm5225J3QPL3 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm5225J3QPL3 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Gm5225J3QPL3 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm5225J3QPL3 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Gm5225J3QPL3 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Gm5225J3QPL3 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gm5225J3QPL3 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC18.76■□□□□ 0.59
Gm5225J3QPL3 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Gm5225J3QPL3 Nsd1-206ENSMUST00000224918 1001 ntBASIC18.76■□□□□ 0.59
Gm5225J3QPL3 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gm5225J3QPL3 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
Gm5225J3QPL3 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gm5225J3QPL3 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gm5225J3QPL3 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gm5225J3QPL3 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gm5225J3QPL3 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Gm5225J3QPL3 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Gm5225J3QPL3 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Gm5225J3QPL3 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gm5225J3QPL3 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gm5225J3QPL3 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gm5225J3QPL3 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gm5225J3QPL3 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Gm5225J3QPL3 Dmtn-209ENSMUST00000228295 2572 ntBASIC18.75■□□□□ 0.59
Gm5225J3QPL3 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gm5225J3QPL3 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
Gm5225J3QPL3 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gm5225J3QPL3 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gm5225J3QPL3 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Gm5225J3QPL3 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Gm5225J3QPL3 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Gm5225J3QPL3 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC18.74■□□□□ 0.59
Gm5225J3QPL3 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Gm5225J3QPL3 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gm5225J3QPL3 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gm5225J3QPL3 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Gm5225J3QPL3 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gm5225J3QPL3 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gm5225J3QPL3 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gm5225J3QPL3 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Gm5225J3QPL3 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gm5225J3QPL3 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Gm5225J3QPL3 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gm5225J3QPL3 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Gm5225J3QPL3 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 71.8 ms