Protein–RNA interactions for Protein: J3KMS6

Gm21818, MCG122238, isoform CRA_a, mousemouse

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm21818J3KMS6 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Gm21818J3KMS6 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC18.24■□□□□ 0.51
Gm21818J3KMS6 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Gm21818J3KMS6 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
Gm21818J3KMS6 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm21818J3KMS6 AC153524.1-201ENSMUST00000220436 1935 ntBASIC18.24■□□□□ 0.51
Gm21818J3KMS6 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm21818J3KMS6 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm21818J3KMS6 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Gm21818J3KMS6 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC18.24■□□□□ 0.51
Gm21818J3KMS6 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm21818J3KMS6 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Gm21818J3KMS6 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm21818J3KMS6 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm21818J3KMS6 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC18.23■□□□□ 0.51
Gm21818J3KMS6 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm21818J3KMS6 Gm22567-201ENSMUST00000175542 342 ntBASIC18.23■□□□□ 0.51
Gm21818J3KMS6 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC18.23■□□□□ 0.51
Gm21818J3KMS6 Gm6311-201ENSMUST00000073790 878 ntBASIC18.23■□□□□ 0.51
Gm21818J3KMS6 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm21818J3KMS6 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm21818J3KMS6 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm21818J3KMS6 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm21818J3KMS6 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Gm21818J3KMS6 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Gm21818J3KMS6 Gm7199-201ENSMUST00000118327 1485 ntBASIC18.22■□□□□ 0.51
Gm21818J3KMS6 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm21818J3KMS6 AC154454.1-201ENSMUST00000225253 216 ntBASIC18.22■□□□□ 0.51
Gm21818J3KMS6 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.22■□□□□ 0.51
Gm21818J3KMS6 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm21818J3KMS6 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm21818J3KMS6 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC18.21■□□□□ 0.51
Gm21818J3KMS6 Mir3960-201ENSMUST00000198213 73 ntBASIC18.21■□□□□ 0.51
Gm21818J3KMS6 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Gm21818J3KMS6 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Gm21818J3KMS6 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
Gm21818J3KMS6 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Gm21818J3KMS6 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC18.2■□□□□ 0.5
Gm21818J3KMS6 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC18.2■□□□□ 0.5
Gm21818J3KMS6 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Gm21818J3KMS6 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC18.2■□□□□ 0.5
Gm21818J3KMS6 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC18.2■□□□□ 0.5
Gm21818J3KMS6 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Gm21818J3KMS6 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.2■□□□□ 0.5
Gm21818J3KMS6 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm21818J3KMS6 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm21818J3KMS6 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Gm21818J3KMS6 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
Gm21818J3KMS6 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Gm21818J3KMS6 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Gm21818J3KMS6 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm21818J3KMS6 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm21818J3KMS6 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm21818J3KMS6 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Gm21818J3KMS6 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Gm21818J3KMS6 Terc-201ENSMUST00000082862 423 ntBASIC18.18■□□□□ 0.5
Gm21818J3KMS6 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Gm21818J3KMS6 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm21818J3KMS6 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm21818J3KMS6 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Gm21818J3KMS6 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm21818J3KMS6 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Gm21818J3KMS6 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm21818J3KMS6 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm21818J3KMS6 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Gm21818J3KMS6 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm21818J3KMS6 Gm12818-201ENSMUST00000117562 1349 ntBASIC18.16■□□□□ 0.5
Gm21818J3KMS6 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm21818J3KMS6 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC18.16■□□□□ 0.5
Gm21818J3KMS6 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Gm21818J3KMS6 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm21818J3KMS6 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm21818J3KMS6 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Gm21818J3KMS6 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.15■□□□□ 0.5
Gm21818J3KMS6 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm21818J3KMS6 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm21818J3KMS6 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC18.15■□□□□ 0.5
Gm21818J3KMS6 Gm45364-201ENSMUST00000210883 159 ntBASIC18.15■□□□□ 0.5
Gm21818J3KMS6 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm21818J3KMS6 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC18.15■□□□□ 0.5
Gm21818J3KMS6 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm21818J3KMS6 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm21818J3KMS6 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm21818J3KMS6 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Gm21818J3KMS6 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gm21818J3KMS6 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gm21818J3KMS6 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC18.14■□□□□ 0.49
Gm21818J3KMS6 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gm21818J3KMS6 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gm21818J3KMS6 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Gm21818J3KMS6 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.14■□□□□ 0.49
Gm21818J3KMS6 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC18.14■□□□□ 0.49
Gm21818J3KMS6 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gm21818J3KMS6 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gm21818J3KMS6 Pkd1-207ENSMUST00000228550 1050 ntBASIC18.13■□□□□ 0.49
Gm21818J3KMS6 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gm21818J3KMS6 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gm21818J3KMS6 Gm37415-201ENSMUST00000192265 2054 ntBASIC18.13■□□□□ 0.49
Gm21818J3KMS6 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Gm21818J3KMS6 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms