Protein–RNA interactions for Protein: J3KML6

Gm20830, Predicted gene, 20830, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm20830J3KML6 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Gm20830J3KML6 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Gm20830J3KML6 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm20830J3KML6 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm20830J3KML6 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC17.49■□□□□ 0.39
Gm20830J3KML6 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Gm20830J3KML6 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm20830J3KML6 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm20830J3KML6 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm20830J3KML6 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Gm20830J3KML6 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm20830J3KML6 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm20830J3KML6 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm20830J3KML6 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC17.49■□□□□ 0.39
Gm20830J3KML6 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm20830J3KML6 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm20830J3KML6 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm20830J3KML6 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC17.48■□□□□ 0.39
Gm20830J3KML6 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm20830J3KML6 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm20830J3KML6 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Gm20830J3KML6 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC17.47■□□□□ 0.39
Gm20830J3KML6 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gm20830J3KML6 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Gm20830J3KML6 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Gm20830J3KML6 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
Gm20830J3KML6 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gm20830J3KML6 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gm20830J3KML6 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gm20830J3KML6 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gm20830J3KML6 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Gm20830J3KML6 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Gm20830J3KML6 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gm20830J3KML6 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gm20830J3KML6 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gm20830J3KML6 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Gm20830J3KML6 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gm20830J3KML6 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gm20830J3KML6 Gm44428-201ENSMUST00000204474 874 ntBASIC17.45■□□□□ 0.38
Gm20830J3KML6 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gm20830J3KML6 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gm20830J3KML6 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Gm20830J3KML6 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gm20830J3KML6 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Gm20830J3KML6 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gm20830J3KML6 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gm20830J3KML6 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Gm20830J3KML6 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Gm20830J3KML6 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gm20830J3KML6 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gm20830J3KML6 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gm20830J3KML6 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gm20830J3KML6 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Gm20830J3KML6 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Gm20830J3KML6 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Gm20830J3KML6 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Gm20830J3KML6 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gm20830J3KML6 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC17.43■□□□□ 0.38
Gm20830J3KML6 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Gm20830J3KML6 Gm6311-201ENSMUST00000073790 878 ntBASIC17.43■□□□□ 0.38
Gm20830J3KML6 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gm20830J3KML6 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gm20830J3KML6 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC17.42■□□□□ 0.38
Gm20830J3KML6 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gm20830J3KML6 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gm20830J3KML6 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Gm20830J3KML6 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Gm20830J3KML6 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gm20830J3KML6 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Gm20830J3KML6 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gm20830J3KML6 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Gm20830J3KML6 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gm20830J3KML6 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC17.41■□□□□ 0.38
Gm20830J3KML6 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC17.41■□□□□ 0.38
Gm20830J3KML6 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gm20830J3KML6 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gm20830J3KML6 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Gm20830J3KML6 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Gm20830J3KML6 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC17.4■□□□□ 0.38
Gm20830J3KML6 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gm20830J3KML6 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Gm20830J3KML6 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC17.4■□□□□ 0.38
Gm20830J3KML6 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Gm20830J3KML6 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC17.4■□□□□ 0.38
Gm20830J3KML6 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC17.4■□□□□ 0.38
Gm20830J3KML6 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC17.4■□□□□ 0.38
Gm20830J3KML6 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gm20830J3KML6 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gm20830J3KML6 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gm20830J3KML6 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gm20830J3KML6 Gm37415-201ENSMUST00000192265 2054 ntBASIC17.4■□□□□ 0.38
Gm20830J3KML6 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC17.39■□□□□ 0.38
Gm20830J3KML6 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Gm20830J3KML6 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC17.39■□□□□ 0.38
Gm20830J3KML6 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Gm20830J3KML6 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Gm20830J3KML6 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Gm20830J3KML6 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Gm20830J3KML6 AC117769.4-201ENSMUST00000225679 685 ntBASIC17.39■□□□□ 0.37
Gm20830J3KML6 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms