Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ccdc188F6WEU2 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ccdc188F6WEU2 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ccdc188F6WEU2 Gm37179-201ENSMUST00000194862 823 ntBASIC22.47■■□□□ 1.19
Ccdc188F6WEU2 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Ccdc188F6WEU2 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ccdc188F6WEU2 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC22.47■■□□□ 1.19
Ccdc188F6WEU2 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ccdc188F6WEU2 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Ccdc188F6WEU2 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ccdc188F6WEU2 Gm8093-201ENSMUST00000128935 1892 ntBASIC22.46■■□□□ 1.19
Ccdc188F6WEU2 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ccdc188F6WEU2 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
Ccdc188F6WEU2 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
Ccdc188F6WEU2 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ccdc188F6WEU2 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Ccdc188F6WEU2 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Ccdc188F6WEU2 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC22.45■■□□□ 1.18
Ccdc188F6WEU2 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC22.45■■□□□ 1.18
Ccdc188F6WEU2 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
Ccdc188F6WEU2 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Ccdc188F6WEU2 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Ccdc188F6WEU2 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Ccdc188F6WEU2 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Ccdc188F6WEU2 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Ccdc188F6WEU2 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Ccdc188F6WEU2 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Ccdc188F6WEU2 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Ccdc188F6WEU2 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Ccdc188F6WEU2 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
Ccdc188F6WEU2 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Ccdc188F6WEU2 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Ccdc188F6WEU2 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Ccdc188F6WEU2 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC22.42■■□□□ 1.18
Ccdc188F6WEU2 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Ccdc188F6WEU2 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Ccdc188F6WEU2 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC22.41■■□□□ 1.18
Ccdc188F6WEU2 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC22.41■■□□□ 1.18
Ccdc188F6WEU2 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Ccdc188F6WEU2 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Ccdc188F6WEU2 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC22.4■■□□□ 1.18
Ccdc188F6WEU2 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
Ccdc188F6WEU2 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ccdc188F6WEU2 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Ccdc188F6WEU2 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Ccdc188F6WEU2 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
Ccdc188F6WEU2 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
Ccdc188F6WEU2 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Ccdc188F6WEU2 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ccdc188F6WEU2 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ccdc188F6WEU2 Gm10849-201ENSMUST00000100397 618 ntBASIC22.38■■□□□ 1.17
Ccdc188F6WEU2 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC22.38■■□□□ 1.17
Ccdc188F6WEU2 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
Ccdc188F6WEU2 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Ccdc188F6WEU2 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ccdc188F6WEU2 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC22.37■■□□□ 1.17
Ccdc188F6WEU2 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC22.37■■□□□ 1.17
Ccdc188F6WEU2 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Ccdc188F6WEU2 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ccdc188F6WEU2 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Ccdc188F6WEU2 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Ccdc188F6WEU2 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC22.36■■□□□ 1.17
Ccdc188F6WEU2 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC22.36■■□□□ 1.17
Ccdc188F6WEU2 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC22.36■■□□□ 1.17
Ccdc188F6WEU2 Gm8493-201ENSMUST00000196881 489 ntBASIC22.36■■□□□ 1.17
Ccdc188F6WEU2 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
Ccdc188F6WEU2 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Ccdc188F6WEU2 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Ccdc188F6WEU2 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC22.35■■□□□ 1.17
Ccdc188F6WEU2 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Ccdc188F6WEU2 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC22.35■■□□□ 1.17
Ccdc188F6WEU2 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC22.35■■□□□ 1.17
Ccdc188F6WEU2 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ccdc188F6WEU2 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC22.34■■□□□ 1.17
Ccdc188F6WEU2 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC22.34■■□□□ 1.17
Ccdc188F6WEU2 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Ccdc188F6WEU2 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC22.34■■□□□ 1.17
Ccdc188F6WEU2 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ccdc188F6WEU2 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ccdc188F6WEU2 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Ccdc188F6WEU2 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Ccdc188F6WEU2 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC22.33■■□□□ 1.17
Ccdc188F6WEU2 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Ccdc188F6WEU2 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC22.33■■□□□ 1.17
Ccdc188F6WEU2 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Ccdc188F6WEU2 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
Ccdc188F6WEU2 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Ccdc188F6WEU2 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Ccdc188F6WEU2 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC22.33■■□□□ 1.17
Ccdc188F6WEU2 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Ccdc188F6WEU2 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Ccdc188F6WEU2 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
Ccdc188F6WEU2 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC22.32■■□□□ 1.16
Ccdc188F6WEU2 Gm12669-201ENSMUST00000122162 1009 ntBASIC22.32■■□□□ 1.16
Ccdc188F6WEU2 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC22.32■■□□□ 1.16
Ccdc188F6WEU2 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
Ccdc188F6WEU2 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Ccdc188F6WEU2 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC22.31■■□□□ 1.16
Ccdc188F6WEU2 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Ccdc188F6WEU2 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms