Protein–RNA interactions for Protein: E9PZM4

Chd2, Chromodomain-helicase-DNA-binding protein 2, mousemouse

Known RBP Predictions only

Length 1,827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd2E9PZM4 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Chd2E9PZM4 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC30.68■■■□□ 2.5
Chd2E9PZM4 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Chd2E9PZM4 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Chd2E9PZM4 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC30.68■■■□□ 2.5
Chd2E9PZM4 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC30.67■■■□□ 2.5
Chd2E9PZM4 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Chd2E9PZM4 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
Chd2E9PZM4 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Chd2E9PZM4 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Chd2E9PZM4 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Chd2E9PZM4 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC30.66■■■□□ 2.5
Chd2E9PZM4 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Chd2E9PZM4 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Chd2E9PZM4 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC30.66■■■□□ 2.5
Chd2E9PZM4 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC30.65■■■□□ 2.5
Chd2E9PZM4 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
Chd2E9PZM4 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Chd2E9PZM4 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC30.64■■■□□ 2.5
Chd2E9PZM4 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC30.64■■■□□ 2.5
Chd2E9PZM4 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC30.64■■■□□ 2.49
Chd2E9PZM4 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Chd2E9PZM4 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC30.63■■■□□ 2.49
Chd2E9PZM4 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
Chd2E9PZM4 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC30.63■■■□□ 2.49
Chd2E9PZM4 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Chd2E9PZM4 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC30.63■■■□□ 2.49
Chd2E9PZM4 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC30.63■■■□□ 2.49
Chd2E9PZM4 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Chd2E9PZM4 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Chd2E9PZM4 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Chd2E9PZM4 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Chd2E9PZM4 Gm10620-201ENSMUST00000098379 1332 ntBASIC30.62■■■□□ 2.49
Chd2E9PZM4 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
Chd2E9PZM4 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Chd2E9PZM4 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Chd2E9PZM4 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC30.6■■■□□ 2.49
Chd2E9PZM4 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
Chd2E9PZM4 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
Chd2E9PZM4 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
Chd2E9PZM4 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Chd2E9PZM4 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Chd2E9PZM4 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Chd2E9PZM4 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Chd2E9PZM4 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC30.59■■■□□ 2.49
Chd2E9PZM4 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC30.58■■■□□ 2.49
Chd2E9PZM4 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC30.58■■■□□ 2.49
Chd2E9PZM4 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC30.58■■■□□ 2.49
Chd2E9PZM4 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Chd2E9PZM4 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Chd2E9PZM4 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Chd2E9PZM4 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Chd2E9PZM4 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC30.56■■■□□ 2.48
Chd2E9PZM4 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Chd2E9PZM4 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC30.56■■■□□ 2.48
Chd2E9PZM4 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
Chd2E9PZM4 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC30.55■■■□□ 2.48
Chd2E9PZM4 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC30.55■■■□□ 2.48
Chd2E9PZM4 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC30.55■■■□□ 2.48
Chd2E9PZM4 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Chd2E9PZM4 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Chd2E9PZM4 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC30.54■■■□□ 2.48
Chd2E9PZM4 Gm6139-201ENSMUST00000079261 882 ntBASIC30.54■■■□□ 2.48
Chd2E9PZM4 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Chd2E9PZM4 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC30.54■■■□□ 2.48
Chd2E9PZM4 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC30.54■■■□□ 2.48
Chd2E9PZM4 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC30.54■■■□□ 2.48
Chd2E9PZM4 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC30.54■■■□□ 2.48
Chd2E9PZM4 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC30.54■■■□□ 2.48
Chd2E9PZM4 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Chd2E9PZM4 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
Chd2E9PZM4 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC30.52■■■□□ 2.48
Chd2E9PZM4 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC30.52■■■□□ 2.48
Chd2E9PZM4 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Chd2E9PZM4 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC30.52■■■□□ 2.48
Chd2E9PZM4 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC30.52■■■□□ 2.48
Chd2E9PZM4 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Chd2E9PZM4 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC30.52■■■□□ 2.48
Chd2E9PZM4 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
Chd2E9PZM4 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC30.51■■■□□ 2.47
Chd2E9PZM4 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Chd2E9PZM4 Gm29257-201ENSMUST00000186115 639 ntBASIC30.5■■■□□ 2.47
Chd2E9PZM4 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Chd2E9PZM4 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC30.5■■■□□ 2.47
Chd2E9PZM4 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Chd2E9PZM4 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC30.5■■■□□ 2.47
Chd2E9PZM4 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC30.5■■■□□ 2.47
Chd2E9PZM4 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Chd2E9PZM4 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Chd2E9PZM4 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC30.48■■■□□ 2.47
Chd2E9PZM4 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC30.48■■■□□ 2.47
Chd2E9PZM4 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Chd2E9PZM4 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC30.48■■■□□ 2.47
Chd2E9PZM4 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
Chd2E9PZM4 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC30.47■■■□□ 2.47
Chd2E9PZM4 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Chd2E9PZM4 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
Chd2E9PZM4 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
Chd2E9PZM4 AC164629.5-201ENSMUST00000220387 632 ntBASIC30.47■■■□□ 2.47
Chd2E9PZM4 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC30.46■■■□□ 2.47
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms