Protein–RNA interactions for Protein: E9PVD3

Dchs1, Protocadherin-16, mousemouse

Predictions only

Length 3,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dchs1E9PVD3 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Dchs1E9PVD3 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Dchs1E9PVD3 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.33■□□□□ 0.69
Dchs1E9PVD3 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Dchs1E9PVD3 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Dchs1E9PVD3 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Dchs1E9PVD3 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Dchs1E9PVD3 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Dchs1E9PVD3 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Dchs1E9PVD3 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.32■□□□□ 0.68
Dchs1E9PVD3 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.32■□□□□ 0.68
Dchs1E9PVD3 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
Dchs1E9PVD3 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Dchs1E9PVD3 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Dchs1E9PVD3 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Dchs1E9PVD3 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Dchs1E9PVD3 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Dchs1E9PVD3 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Dchs1E9PVD3 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Dchs1E9PVD3 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.31■□□□□ 0.68
Dchs1E9PVD3 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.31■□□□□ 0.68
Dchs1E9PVD3 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.31■□□□□ 0.68
Dchs1E9PVD3 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Dchs1E9PVD3 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.3■□□□□ 0.68
Dchs1E9PVD3 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.3■□□□□ 0.68
Dchs1E9PVD3 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.3■□□□□ 0.68
Dchs1E9PVD3 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Dchs1E9PVD3 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Dchs1E9PVD3 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Dchs1E9PVD3 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Dchs1E9PVD3 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Dchs1E9PVD3 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Dchs1E9PVD3 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.29■□□□□ 0.68
Dchs1E9PVD3 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Dchs1E9PVD3 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Dchs1E9PVD3 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Dchs1E9PVD3 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Dchs1E9PVD3 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.28■□□□□ 0.68
Dchs1E9PVD3 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Dchs1E9PVD3 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Dchs1E9PVD3 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Dchs1E9PVD3 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Dchs1E9PVD3 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.27■□□□□ 0.68
Dchs1E9PVD3 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Dchs1E9PVD3 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.27■□□□□ 0.68
Dchs1E9PVD3 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Dchs1E9PVD3 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC19.27■□□□□ 0.68
Dchs1E9PVD3 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Dchs1E9PVD3 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Dchs1E9PVD3 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.27■□□□□ 0.68
Dchs1E9PVD3 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Dchs1E9PVD3 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Dchs1E9PVD3 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Dchs1E9PVD3 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Dchs1E9PVD3 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Dchs1E9PVD3 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Dchs1E9PVD3 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Dchs1E9PVD3 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Dchs1E9PVD3 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Dchs1E9PVD3 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.26■□□□□ 0.67
Dchs1E9PVD3 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Dchs1E9PVD3 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.26■□□□□ 0.67
Dchs1E9PVD3 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Dchs1E9PVD3 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Dchs1E9PVD3 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Dchs1E9PVD3 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Dchs1E9PVD3 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Dchs1E9PVD3 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Dchs1E9PVD3 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Dchs1E9PVD3 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Dchs1E9PVD3 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.25■□□□□ 0.67
Dchs1E9PVD3 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
Dchs1E9PVD3 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.25■□□□□ 0.67
Dchs1E9PVD3 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Dchs1E9PVD3 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.24■□□□□ 0.67
Dchs1E9PVD3 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.24■□□□□ 0.67
Dchs1E9PVD3 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Dchs1E9PVD3 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC19.24■□□□□ 0.67
Dchs1E9PVD3 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Dchs1E9PVD3 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Dchs1E9PVD3 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.24■□□□□ 0.67
Dchs1E9PVD3 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Dchs1E9PVD3 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Dchs1E9PVD3 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Dchs1E9PVD3 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Dchs1E9PVD3 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Dchs1E9PVD3 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.23■□□□□ 0.67
Dchs1E9PVD3 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Dchs1E9PVD3 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Dchs1E9PVD3 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Dchs1E9PVD3 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.22■□□□□ 0.67
Dchs1E9PVD3 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.22■□□□□ 0.67
Dchs1E9PVD3 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC19.22■□□□□ 0.67
Dchs1E9PVD3 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Dchs1E9PVD3 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Dchs1E9PVD3 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Dchs1E9PVD3 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Dchs1E9PVD3 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Dchs1E9PVD3 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Dchs1E9PVD3 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms