Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Shank1D3YZU1 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Shank1D3YZU1 Gm18284-201ENSMUST00000172604 624 ntBASIC19.3■□□□□ 0.68
Shank1D3YZU1 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.3■□□□□ 0.68
Shank1D3YZU1 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Shank1D3YZU1 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Shank1D3YZU1 AC117245.4-201ENSMUST00000217388 1646 ntBASIC19.29■□□□□ 0.68
Shank1D3YZU1 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Shank1D3YZU1 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Shank1D3YZU1 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19.29■□□□□ 0.68
Shank1D3YZU1 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Shank1D3YZU1 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Shank1D3YZU1 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Shank1D3YZU1 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC19.28■□□□□ 0.68
Shank1D3YZU1 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Shank1D3YZU1 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Shank1D3YZU1 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Shank1D3YZU1 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Shank1D3YZU1 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Shank1D3YZU1 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Shank1D3YZU1 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.27■□□□□ 0.68
Shank1D3YZU1 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Shank1D3YZU1 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Shank1D3YZU1 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.27■□□□□ 0.68
Shank1D3YZU1 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
Shank1D3YZU1 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Shank1D3YZU1 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Shank1D3YZU1 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.26■□□□□ 0.67
Shank1D3YZU1 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Shank1D3YZU1 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Shank1D3YZU1 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.26■□□□□ 0.67
Shank1D3YZU1 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Shank1D3YZU1 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Shank1D3YZU1 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Shank1D3YZU1 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Shank1D3YZU1 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Shank1D3YZU1 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.25■□□□□ 0.67
Shank1D3YZU1 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.25■□□□□ 0.67
Shank1D3YZU1 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Shank1D3YZU1 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Shank1D3YZU1 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Shank1D3YZU1 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Shank1D3YZU1 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Shank1D3YZU1 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.25■□□□□ 0.67
Shank1D3YZU1 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Shank1D3YZU1 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.25■□□□□ 0.67
Shank1D3YZU1 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Shank1D3YZU1 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC19.24■□□□□ 0.67
Shank1D3YZU1 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.24■□□□□ 0.67
Shank1D3YZU1 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Shank1D3YZU1 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Shank1D3YZU1 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.24■□□□□ 0.67
Shank1D3YZU1 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.23■□□□□ 0.67
Shank1D3YZU1 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Shank1D3YZU1 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Shank1D3YZU1 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.23■□□□□ 0.67
Shank1D3YZU1 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Shank1D3YZU1 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Shank1D3YZU1 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Shank1D3YZU1 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Shank1D3YZU1 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Shank1D3YZU1 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Shank1D3YZU1 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Shank1D3YZU1 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.22■□□□□ 0.67
Shank1D3YZU1 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shank1D3YZU1 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shank1D3YZU1 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Shank1D3YZU1 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Shank1D3YZU1 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Shank1D3YZU1 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Shank1D3YZU1 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC19.2■□□□□ 0.66
Shank1D3YZU1 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Shank1D3YZU1 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.19■□□□□ 0.66
Shank1D3YZU1 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.19■□□□□ 0.66
Shank1D3YZU1 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.19■□□□□ 0.66
Shank1D3YZU1 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Shank1D3YZU1 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Shank1D3YZU1 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Shank1D3YZU1 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Shank1D3YZU1 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.18■□□□□ 0.66
Shank1D3YZU1 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Shank1D3YZU1 Gm29257-201ENSMUST00000186115 639 ntBASIC19.17■□□□□ 0.66
Shank1D3YZU1 Gm8495-201ENSMUST00000188740 694 ntBASIC19.17■□□□□ 0.66
Shank1D3YZU1 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.17■□□□□ 0.66
Shank1D3YZU1 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.17■□□□□ 0.66
Shank1D3YZU1 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Shank1D3YZU1 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Shank1D3YZU1 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.17■□□□□ 0.66
Shank1D3YZU1 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.17■□□□□ 0.66
Shank1D3YZU1 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Shank1D3YZU1 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Shank1D3YZU1 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Shank1D3YZU1 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Shank1D3YZU1 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Shank1D3YZU1 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Shank1D3YZU1 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Shank1D3YZU1 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Shank1D3YZU1 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Shank1D3YZU1 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Shank1D3YZU1 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms