Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm12887B1AVM1 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Gm12887B1AVM1 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC17.33■□□□□ 0.36
Gm12887B1AVM1 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm12887B1AVM1 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC17.33■□□□□ 0.36
Gm12887B1AVM1 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
Gm12887B1AVM1 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm12887B1AVM1 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Gm12887B1AVM1 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm12887B1AVM1 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm12887B1AVM1 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm12887B1AVM1 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm12887B1AVM1 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm12887B1AVM1 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm12887B1AVM1 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm12887B1AVM1 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm12887B1AVM1 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC17.31■□□□□ 0.36
Gm12887B1AVM1 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Gm12887B1AVM1 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm12887B1AVM1 Gm42418-201ENSMUST00000182010 1831 ntBASIC17.31■□□□□ 0.36
Gm12887B1AVM1 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm12887B1AVM1 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm12887B1AVM1 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Gm12887B1AVM1 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC17.3■□□□□ 0.36
Gm12887B1AVM1 Gm42809-201ENSMUST00000198429 1138 ntBASIC17.3■□□□□ 0.36
Gm12887B1AVM1 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Gm12887B1AVM1 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm12887B1AVM1 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Gm12887B1AVM1 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Gm12887B1AVM1 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC17.29■□□□□ 0.36
Gm12887B1AVM1 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Gm12887B1AVM1 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC17.29■□□□□ 0.36
Gm12887B1AVM1 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Gm12887B1AVM1 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm12887B1AVM1 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm12887B1AVM1 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm12887B1AVM1 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm12887B1AVM1 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm12887B1AVM1 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Gm12887B1AVM1 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm12887B1AVM1 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm12887B1AVM1 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm12887B1AVM1 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm12887B1AVM1 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm12887B1AVM1 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm12887B1AVM1 Gm7199-201ENSMUST00000118327 1485 ntBASIC17.27■□□□□ 0.36
Gm12887B1AVM1 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC17.27■□□□□ 0.36
Gm12887B1AVM1 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC17.27■□□□□ 0.36
Gm12887B1AVM1 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm12887B1AVM1 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC17.27■□□□□ 0.35
Gm12887B1AVM1 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC17.26■□□□□ 0.35
Gm12887B1AVM1 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Gm12887B1AVM1 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Gm12887B1AVM1 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm12887B1AVM1 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
Gm12887B1AVM1 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm12887B1AVM1 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Gm12887B1AVM1 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC17.26■□□□□ 0.35
Gm12887B1AVM1 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Gm12887B1AVM1 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm12887B1AVM1 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm12887B1AVM1 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC17.25■□□□□ 0.35
Gm12887B1AVM1 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.25■□□□□ 0.35
Gm12887B1AVM1 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC17.25■□□□□ 0.35
Gm12887B1AVM1 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC17.25■□□□□ 0.35
Gm12887B1AVM1 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
Gm12887B1AVM1 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm12887B1AVM1 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm12887B1AVM1 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Gm12887B1AVM1 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.25■□□□□ 0.35
Gm12887B1AVM1 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm12887B1AVM1 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Gm12887B1AVM1 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm12887B1AVM1 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm12887B1AVM1 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm12887B1AVM1 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Gm12887B1AVM1 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm12887B1AVM1 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm12887B1AVM1 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm12887B1AVM1 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Gm12887B1AVM1 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm12887B1AVM1 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm12887B1AVM1 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC17.23■□□□□ 0.35
Gm12887B1AVM1 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm12887B1AVM1 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm12887B1AVM1 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm12887B1AVM1 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm12887B1AVM1 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC17.22■□□□□ 0.35
Gm12887B1AVM1 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm12887B1AVM1 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
Gm12887B1AVM1 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm12887B1AVM1 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Gm12887B1AVM1 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm12887B1AVM1 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm12887B1AVM1 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Gm12887B1AVM1 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
Gm12887B1AVM1 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm12887B1AVM1 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm12887B1AVM1 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm12887B1AVM1 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms