Protein–RNA interactions for Protein: A3KG49

Gm5640, Predicted gene 5640, mousemouse

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5640A3KG49 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Gm5640A3KG49 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Gm5640A3KG49 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Gm5640A3KG49 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Gm5640A3KG49 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Gm5640A3KG49 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21.69■■□□□ 1.06
Gm5640A3KG49 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC21.69■■□□□ 1.06
Gm5640A3KG49 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Gm5640A3KG49 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Gm5640A3KG49 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Gm5640A3KG49 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.69■■□□□ 1.06
Gm5640A3KG49 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC21.69■■□□□ 1.06
Gm5640A3KG49 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Gm5640A3KG49 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Gm5640A3KG49 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Gm5640A3KG49 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Gm5640A3KG49 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC21.68■■□□□ 1.06
Gm5640A3KG49 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Gm5640A3KG49 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Gm5640A3KG49 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Gm5640A3KG49 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Gm5640A3KG49 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC21.68■■□□□ 1.06
Gm5640A3KG49 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Gm5640A3KG49 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Gm5640A3KG49 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Gm5640A3KG49 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Gm5640A3KG49 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Gm5640A3KG49 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Gm5640A3KG49 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC21.67■■□□□ 1.06
Gm5640A3KG49 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.67■■□□□ 1.06
Gm5640A3KG49 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
Gm5640A3KG49 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC21.66■■□□□ 1.06
Gm5640A3KG49 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.66■■□□□ 1.06
Gm5640A3KG49 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Gm5640A3KG49 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Gm5640A3KG49 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Gm5640A3KG49 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.66■■□□□ 1.06
Gm5640A3KG49 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Gm5640A3KG49 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Gm5640A3KG49 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Gm5640A3KG49 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Gm5640A3KG49 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.65■■□□□ 1.06
Gm5640A3KG49 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC21.65■■□□□ 1.06
Gm5640A3KG49 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC21.65■■□□□ 1.06
Gm5640A3KG49 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Gm5640A3KG49 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC21.64■■□□□ 1.06
Gm5640A3KG49 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Gm5640A3KG49 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC21.64■■□□□ 1.06
Gm5640A3KG49 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC21.64■■□□□ 1.05
Gm5640A3KG49 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC21.64■■□□□ 1.05
Gm5640A3KG49 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Gm5640A3KG49 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Gm5640A3KG49 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Gm5640A3KG49 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Gm5640A3KG49 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Gm5640A3KG49 Gm42809-201ENSMUST00000198429 1138 ntBASIC21.63■■□□□ 1.05
Gm5640A3KG49 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Gm5640A3KG49 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Gm5640A3KG49 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Gm5640A3KG49 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Gm5640A3KG49 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Gm5640A3KG49 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Gm5640A3KG49 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Gm5640A3KG49 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Gm5640A3KG49 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Gm5640A3KG49 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Gm5640A3KG49 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Gm5640A3KG49 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC21.61■■□□□ 1.05
Gm5640A3KG49 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC21.61■■□□□ 1.05
Gm5640A3KG49 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC21.61■■□□□ 1.05
Gm5640A3KG49 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.61■■□□□ 1.05
Gm5640A3KG49 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Gm5640A3KG49 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Gm5640A3KG49 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
Gm5640A3KG49 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC21.6■■□□□ 1.05
Gm5640A3KG49 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Gm5640A3KG49 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC21.6■■□□□ 1.05
Gm5640A3KG49 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Gm5640A3KG49 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.6■■□□□ 1.05
Gm5640A3KG49 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Gm5640A3KG49 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Gm5640A3KG49 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
Gm5640A3KG49 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Gm5640A3KG49 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Gm5640A3KG49 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC21.59■■□□□ 1.05
Gm5640A3KG49 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Gm5640A3KG49 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
Gm5640A3KG49 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Gm5640A3KG49 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.58■■□□□ 1.05
Gm5640A3KG49 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.58■■□□□ 1.05
Gm5640A3KG49 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Gm5640A3KG49 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Gm5640A3KG49 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
Gm5640A3KG49 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Gm5640A3KG49 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Gm5640A3KG49 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Gm5640A3KG49 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Gm5640A3KG49 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Gm5640A3KG49 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Gm5640A3KG49 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms