Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trav12d-1A0N8R0 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Trav12d-1A0N8R0 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC17.27■□□□□ 0.35
Trav12d-1A0N8R0 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trav12d-1A0N8R0 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav12d-1A0N8R0 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav12d-1A0N8R0 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Trav12d-1A0N8R0 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav12d-1A0N8R0 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Trav12d-1A0N8R0 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav12d-1A0N8R0 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC17.26■□□□□ 0.35
Trav12d-1A0N8R0 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC17.26■□□□□ 0.35
Trav12d-1A0N8R0 Pkd1-207ENSMUST00000228550 1050 ntBASIC17.26■□□□□ 0.35
Trav12d-1A0N8R0 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trav12d-1A0N8R0 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trav12d-1A0N8R0 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav12d-1A0N8R0 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
Trav12d-1A0N8R0 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Trav12d-1A0N8R0 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav12d-1A0N8R0 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Trav12d-1A0N8R0 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav12d-1A0N8R0 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav12d-1A0N8R0 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav12d-1A0N8R0 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav12d-1A0N8R0 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Trav12d-1A0N8R0 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav12d-1A0N8R0 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav12d-1A0N8R0 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav12d-1A0N8R0 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav12d-1A0N8R0 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Trav12d-1A0N8R0 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav12d-1A0N8R0 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav12d-1A0N8R0 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav12d-1A0N8R0 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Trav12d-1A0N8R0 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Trav12d-1A0N8R0 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav12d-1A0N8R0 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC17.22■□□□□ 0.35
Trav12d-1A0N8R0 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav12d-1A0N8R0 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trav12d-1A0N8R0 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
Trav12d-1A0N8R0 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC17.22■□□□□ 0.35
Trav12d-1A0N8R0 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trav12d-1A0N8R0 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Trav12d-1A0N8R0 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Trav12d-1A0N8R0 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav12d-1A0N8R0 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav12d-1A0N8R0 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Trav12d-1A0N8R0 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trav12d-1A0N8R0 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav12d-1A0N8R0 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trav12d-1A0N8R0 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav12d-1A0N8R0 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav12d-1A0N8R0 AC167019.3-201ENSMUST00000228225 1266 ntBASIC17.21■□□□□ 0.35
Trav12d-1A0N8R0 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav12d-1A0N8R0 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC17.21■□□□□ 0.35
Trav12d-1A0N8R0 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trav12d-1A0N8R0 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Trav12d-1A0N8R0 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav12d-1A0N8R0 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trav12d-1A0N8R0 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.34
Trav12d-1A0N8R0 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav12d-1A0N8R0 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Trav12d-1A0N8R0 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav12d-1A0N8R0 Gm44428-201ENSMUST00000204474 874 ntBASIC17.2■□□□□ 0.34
Trav12d-1A0N8R0 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trav12d-1A0N8R0 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav12d-1A0N8R0 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav12d-1A0N8R0 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav12d-1A0N8R0 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17.19■□□□□ 0.34
Trav12d-1A0N8R0 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav12d-1A0N8R0 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav12d-1A0N8R0 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav12d-1A0N8R0 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav12d-1A0N8R0 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Trav12d-1A0N8R0 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav12d-1A0N8R0 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC17.19■□□□□ 0.34
Trav12d-1A0N8R0 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav12d-1A0N8R0 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav12d-1A0N8R0 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav12d-1A0N8R0 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav12d-1A0N8R0 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav12d-1A0N8R0 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trav12d-1A0N8R0 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav12d-1A0N8R0 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav12d-1A0N8R0 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Trav12d-1A0N8R0 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav12d-1A0N8R0 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trav12d-1A0N8R0 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav12d-1A0N8R0 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trav12d-1A0N8R0 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC17.16■□□□□ 0.34
Trav12d-1A0N8R0 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Trav12d-1A0N8R0 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav12d-1A0N8R0 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC17.16■□□□□ 0.34
Trav12d-1A0N8R0 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav12d-1A0N8R0 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav12d-1A0N8R0 AC117769.4-201ENSMUST00000225679 685 ntBASIC17.16■□□□□ 0.34
Trav12d-1A0N8R0 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav12d-1A0N8R0 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav12d-1A0N8R0 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav12d-1A0N8R0 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms