Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Gm3854A0A1B0GSS6 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
Gm3854A0A1B0GSS6 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Gm3854A0A1B0GSS6 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Gm3854A0A1B0GSS6 Gm21956-201ENSMUST00000179946 522 ntBASIC21.64■■□□□ 1.05
Gm3854A0A1B0GSS6 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC21.64■■□□□ 1.05
Gm3854A0A1B0GSS6 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Gm3854A0A1B0GSS6 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Gm3854A0A1B0GSS6 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Gm3854A0A1B0GSS6 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
Gm3854A0A1B0GSS6 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Gm3854A0A1B0GSS6 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Gm3854A0A1B0GSS6 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Gm3854A0A1B0GSS6 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Gm3854A0A1B0GSS6 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Gm3854A0A1B0GSS6 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC21.61■■□□□ 1.05
Gm3854A0A1B0GSS6 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Gm3854A0A1B0GSS6 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Gm3854A0A1B0GSS6 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Gm3854A0A1B0GSS6 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC21.61■■□□□ 1.05
Gm3854A0A1B0GSS6 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.61■■□□□ 1.05
Gm3854A0A1B0GSS6 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Gm3854A0A1B0GSS6 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Gm3854A0A1B0GSS6 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.61■■□□□ 1.05
Gm3854A0A1B0GSS6 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Gm3854A0A1B0GSS6 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Gm3854A0A1B0GSS6 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Gm3854A0A1B0GSS6 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Gm3854A0A1B0GSS6 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Gm3854A0A1B0GSS6 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Gm3854A0A1B0GSS6 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Gm3854A0A1B0GSS6 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Gm3854A0A1B0GSS6 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Gm3854A0A1B0GSS6 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Gm3854A0A1B0GSS6 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Gm3854A0A1B0GSS6 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Gm3854A0A1B0GSS6 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Gm3854A0A1B0GSS6 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC21.59■■□□□ 1.05
Gm3854A0A1B0GSS6 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC21.59■■□□□ 1.05
Gm3854A0A1B0GSS6 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC21.59■■□□□ 1.05
Gm3854A0A1B0GSS6 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Gm3854A0A1B0GSS6 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Gm3854A0A1B0GSS6 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC21.59■■□□□ 1.05
Gm3854A0A1B0GSS6 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Gm3854A0A1B0GSS6 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Gm3854A0A1B0GSS6 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Gm3854A0A1B0GSS6 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Gm3854A0A1B0GSS6 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Gm3854A0A1B0GSS6 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.57■■□□□ 1.04
Gm3854A0A1B0GSS6 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC21.57■■□□□ 1.04
Gm3854A0A1B0GSS6 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Gm3854A0A1B0GSS6 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
Gm3854A0A1B0GSS6 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Gm3854A0A1B0GSS6 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Gm3854A0A1B0GSS6 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.56■■□□□ 1.04
Gm3854A0A1B0GSS6 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC21.56■■□□□ 1.04
Gm3854A0A1B0GSS6 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC21.56■■□□□ 1.04
Gm3854A0A1B0GSS6 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.56■■□□□ 1.04
Gm3854A0A1B0GSS6 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Gm3854A0A1B0GSS6 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Gm3854A0A1B0GSS6 Gm12922-201ENSMUST00000120626 809 ntBASIC21.55■■□□□ 1.04
Gm3854A0A1B0GSS6 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC21.55■■□□□ 1.04
Gm3854A0A1B0GSS6 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Gm3854A0A1B0GSS6 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Gm3854A0A1B0GSS6 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Gm3854A0A1B0GSS6 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Gm3854A0A1B0GSS6 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Gm3854A0A1B0GSS6 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Gm3854A0A1B0GSS6 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC21.54■■□□□ 1.04
Gm3854A0A1B0GSS6 AC140930.3-201ENSMUST00000222935 274 ntBASIC21.54■■□□□ 1.04
Gm3854A0A1B0GSS6 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Gm3854A0A1B0GSS6 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC21.54■■□□□ 1.04
Gm3854A0A1B0GSS6 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Gm3854A0A1B0GSS6 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Gm3854A0A1B0GSS6 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
Gm3854A0A1B0GSS6 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Gm3854A0A1B0GSS6 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Gm3854A0A1B0GSS6 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Gm3854A0A1B0GSS6 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Gm3854A0A1B0GSS6 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.52■■□□□ 1.04
Gm3854A0A1B0GSS6 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Gm3854A0A1B0GSS6 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
Gm3854A0A1B0GSS6 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Gm3854A0A1B0GSS6 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Gm3854A0A1B0GSS6 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Gm3854A0A1B0GSS6 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Gm3854A0A1B0GSS6 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC21.5■■□□□ 1.03
Gm3854A0A1B0GSS6 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Gm3854A0A1B0GSS6 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Gm3854A0A1B0GSS6 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Gm3854A0A1B0GSS6 Gm10620-201ENSMUST00000098379 1332 ntBASIC21.5■■□□□ 1.03
Gm3854A0A1B0GSS6 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Gm3854A0A1B0GSS6 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Gm3854A0A1B0GSS6 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Gm3854A0A1B0GSS6 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Gm3854A0A1B0GSS6 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Gm3854A0A1B0GSS6 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Gm3854A0A1B0GSS6 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Gm3854A0A1B0GSS6 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Gm3854A0A1B0GSS6 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms