Protein–RNA interactions for Protein: A0A0B4J1J2

Igkv5-43, Immunoglobulin kappa chain variable 5-43 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-43A0A0B4J1J2 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Igkv5-43A0A0B4J1J2 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC22.22■■□□□ 1.15
Igkv5-43A0A0B4J1J2 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Igkv5-43A0A0B4J1J2 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
Igkv5-43A0A0B4J1J2 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Igkv5-43A0A0B4J1J2 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Igkv5-43A0A0B4J1J2 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC22.22■■□□□ 1.15
Igkv5-43A0A0B4J1J2 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Igkv5-43A0A0B4J1J2 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
Igkv5-43A0A0B4J1J2 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Igkv5-43A0A0B4J1J2 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
Igkv5-43A0A0B4J1J2 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
Igkv5-43A0A0B4J1J2 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Igkv5-43A0A0B4J1J2 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Igkv5-43A0A0B4J1J2 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Igkv5-43A0A0B4J1J2 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Igkv5-43A0A0B4J1J2 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Igkv5-43A0A0B4J1J2 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
Igkv5-43A0A0B4J1J2 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
Igkv5-43A0A0B4J1J2 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC22.19■■□□□ 1.14
Igkv5-43A0A0B4J1J2 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
Igkv5-43A0A0B4J1J2 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Igkv5-43A0A0B4J1J2 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Igkv5-43A0A0B4J1J2 Gm8093-201ENSMUST00000128935 1892 ntBASIC22.19■■□□□ 1.14
Igkv5-43A0A0B4J1J2 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Igkv5-43A0A0B4J1J2 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC22.18■■□□□ 1.14
Igkv5-43A0A0B4J1J2 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Igkv5-43A0A0B4J1J2 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Igkv5-43A0A0B4J1J2 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Igkv5-43A0A0B4J1J2 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC22.17■■□□□ 1.14
Igkv5-43A0A0B4J1J2 Gm45102-201ENSMUST00000207427 857 ntBASIC22.17■■□□□ 1.14
Igkv5-43A0A0B4J1J2 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC22.17■■□□□ 1.14
Igkv5-43A0A0B4J1J2 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Igkv5-43A0A0B4J1J2 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Igkv5-43A0A0B4J1J2 Gm9959-201ENSMUST00000068277 390 ntBASIC22.17■■□□□ 1.14
Igkv5-43A0A0B4J1J2 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Igkv5-43A0A0B4J1J2 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Igkv5-43A0A0B4J1J2 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Igkv5-43A0A0B4J1J2 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Igkv5-43A0A0B4J1J2 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Igkv5-43A0A0B4J1J2 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC22.16■■□□□ 1.14
Igkv5-43A0A0B4J1J2 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
Igkv5-43A0A0B4J1J2 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Igkv5-43A0A0B4J1J2 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC22.15■■□□□ 1.14
Igkv5-43A0A0B4J1J2 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Igkv5-43A0A0B4J1J2 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Igkv5-43A0A0B4J1J2 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC22.15■■□□□ 1.14
Igkv5-43A0A0B4J1J2 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC22.15■■□□□ 1.14
Igkv5-43A0A0B4J1J2 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC22.15■■□□□ 1.14
Igkv5-43A0A0B4J1J2 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
Igkv5-43A0A0B4J1J2 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Igkv5-43A0A0B4J1J2 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Igkv5-43A0A0B4J1J2 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
Igkv5-43A0A0B4J1J2 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Igkv5-43A0A0B4J1J2 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Igkv5-43A0A0B4J1J2 AC115037.1-201ENSMUST00000223391 2173 ntBASIC22.14■■□□□ 1.13
Igkv5-43A0A0B4J1J2 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Igkv5-43A0A0B4J1J2 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Igkv5-43A0A0B4J1J2 Gm5131-201ENSMUST00000212776 1238 ntBASIC22.14■■□□□ 1.13
Igkv5-43A0A0B4J1J2 Rps24-207ENSMUST00000224568 714 ntBASIC22.14■■□□□ 1.13
Igkv5-43A0A0B4J1J2 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Igkv5-43A0A0B4J1J2 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC22.13■■□□□ 1.13
Igkv5-43A0A0B4J1J2 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
Igkv5-43A0A0B4J1J2 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
Igkv5-43A0A0B4J1J2 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Igkv5-43A0A0B4J1J2 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
Igkv5-43A0A0B4J1J2 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Igkv5-43A0A0B4J1J2 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC22.12■■□□□ 1.13
Igkv5-43A0A0B4J1J2 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Igkv5-43A0A0B4J1J2 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
Igkv5-43A0A0B4J1J2 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Igkv5-43A0A0B4J1J2 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Igkv5-43A0A0B4J1J2 Gm14117-201ENSMUST00000122417 843 ntBASIC22.11■■□□□ 1.13
Igkv5-43A0A0B4J1J2 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC22.11■■□□□ 1.13
Igkv5-43A0A0B4J1J2 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Igkv5-43A0A0B4J1J2 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Igkv5-43A0A0B4J1J2 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Igkv5-43A0A0B4J1J2 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Igkv5-43A0A0B4J1J2 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Igkv5-43A0A0B4J1J2 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Igkv5-43A0A0B4J1J2 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC22.1■■□□□ 1.13
Igkv5-43A0A0B4J1J2 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
Igkv5-43A0A0B4J1J2 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Igkv5-43A0A0B4J1J2 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Igkv5-43A0A0B4J1J2 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
Igkv5-43A0A0B4J1J2 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Igkv5-43A0A0B4J1J2 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC22.09■■□□□ 1.13
Igkv5-43A0A0B4J1J2 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC22.09■■□□□ 1.13
Igkv5-43A0A0B4J1J2 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Igkv5-43A0A0B4J1J2 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
Igkv5-43A0A0B4J1J2 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Igkv5-43A0A0B4J1J2 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Igkv5-43A0A0B4J1J2 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.12
Igkv5-43A0A0B4J1J2 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Igkv5-43A0A0B4J1J2 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
Igkv5-43A0A0B4J1J2 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Igkv5-43A0A0B4J1J2 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Igkv5-43A0A0B4J1J2 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Igkv5-43A0A0B4J1J2 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Igkv5-43A0A0B4J1J2 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC22.07■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms