Protein–RNA interactions for Protein: A0A0B4J1H4

Trbv19, T cell receptor beta, variable 19 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv19A0A0B4J1H4 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC17.21■□□□□ 0.35
Trbv19A0A0B4J1H4 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
Trbv19A0A0B4J1H4 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trbv19A0A0B4J1H4 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trbv19A0A0B4J1H4 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC17.21■□□□□ 0.35
Trbv19A0A0B4J1H4 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC17.21■□□□□ 0.35
Trbv19A0A0B4J1H4 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trbv19A0A0B4J1H4 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trbv19A0A0B4J1H4 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trbv19A0A0B4J1H4 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Trbv19A0A0B4J1H4 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trbv19A0A0B4J1H4 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trbv19A0A0B4J1H4 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trbv19A0A0B4J1H4 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Trbv19A0A0B4J1H4 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trbv19A0A0B4J1H4 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Trbv19A0A0B4J1H4 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Trbv19A0A0B4J1H4 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trbv19A0A0B4J1H4 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trbv19A0A0B4J1H4 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC17.19■□□□□ 0.34
Trbv19A0A0B4J1H4 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trbv19A0A0B4J1H4 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
Trbv19A0A0B4J1H4 Gm32051-202ENSMUST00000197905 2385 ntBASIC17.19■□□□□ 0.34
Trbv19A0A0B4J1H4 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trbv19A0A0B4J1H4 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trbv19A0A0B4J1H4 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trbv19A0A0B4J1H4 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trbv19A0A0B4J1H4 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trbv19A0A0B4J1H4 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trbv19A0A0B4J1H4 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trbv19A0A0B4J1H4 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trbv19A0A0B4J1H4 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trbv19A0A0B4J1H4 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trbv19A0A0B4J1H4 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trbv19A0A0B4J1H4 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trbv19A0A0B4J1H4 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trbv19A0A0B4J1H4 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trbv19A0A0B4J1H4 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trbv19A0A0B4J1H4 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trbv19A0A0B4J1H4 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trbv19A0A0B4J1H4 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trbv19A0A0B4J1H4 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trbv19A0A0B4J1H4 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trbv19A0A0B4J1H4 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trbv19A0A0B4J1H4 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trbv19A0A0B4J1H4 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trbv19A0A0B4J1H4 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trbv19A0A0B4J1H4 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC17.15■□□□□ 0.34
Trbv19A0A0B4J1H4 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Trbv19A0A0B4J1H4 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trbv19A0A0B4J1H4 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC17.15■□□□□ 0.34
Trbv19A0A0B4J1H4 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trbv19A0A0B4J1H4 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Trbv19A0A0B4J1H4 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trbv19A0A0B4J1H4 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Trbv19A0A0B4J1H4 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trbv19A0A0B4J1H4 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trbv19A0A0B4J1H4 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trbv19A0A0B4J1H4 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trbv19A0A0B4J1H4 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trbv19A0A0B4J1H4 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trbv19A0A0B4J1H4 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trbv19A0A0B4J1H4 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trbv19A0A0B4J1H4 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trbv19A0A0B4J1H4 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trbv19A0A0B4J1H4 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trbv19A0A0B4J1H4 Gm37415-201ENSMUST00000192265 2054 ntBASIC17.12■□□□□ 0.33
Trbv19A0A0B4J1H4 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trbv19A0A0B4J1H4 AC124392.1-201ENSMUST00000225172 5324 ntBASIC17.11■□□□□ 0.33
Trbv19A0A0B4J1H4 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trbv19A0A0B4J1H4 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trbv19A0A0B4J1H4 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Trbv19A0A0B4J1H4 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trbv19A0A0B4J1H4 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trbv19A0A0B4J1H4 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trbv19A0A0B4J1H4 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trbv19A0A0B4J1H4 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trbv19A0A0B4J1H4 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Trbv19A0A0B4J1H4 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trbv19A0A0B4J1H4 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trbv19A0A0B4J1H4 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Trbv19A0A0B4J1H4 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trbv19A0A0B4J1H4 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trbv19A0A0B4J1H4 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trbv19A0A0B4J1H4 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trbv19A0A0B4J1H4 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trbv19A0A0B4J1H4 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trbv19A0A0B4J1H4 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trbv19A0A0B4J1H4 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC17.1■□□□□ 0.33
Trbv19A0A0B4J1H4 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC17.1■□□□□ 0.33
Trbv19A0A0B4J1H4 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trbv19A0A0B4J1H4 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Trbv19A0A0B4J1H4 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trbv19A0A0B4J1H4 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trbv19A0A0B4J1H4 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Trbv19A0A0B4J1H4 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trbv19A0A0B4J1H4 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Trbv19A0A0B4J1H4 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC17.09■□□□□ 0.33
Trbv19A0A0B4J1H4 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Trbv19A0A0B4J1H4 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms