Protein–RNA interactions for Protein: A0A0A6YXC3

Ighv1-52, Immunoglobulin heavy variable 1-52 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-52A0A0A6YXC3 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ighv1-52A0A0A6YXC3 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ighv1-52A0A0A6YXC3 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Ighv1-52A0A0A6YXC3 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC16.32■□□□□ 0.2
Ighv1-52A0A0A6YXC3 Gm45444-201ENSMUST00000211394 898 ntBASIC16.32■□□□□ 0.2
Ighv1-52A0A0A6YXC3 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Ighv1-52A0A0A6YXC3 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ighv1-52A0A0A6YXC3 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ighv1-52A0A0A6YXC3 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
Ighv1-52A0A0A6YXC3 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ighv1-52A0A0A6YXC3 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ighv1-52A0A0A6YXC3 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ighv1-52A0A0A6YXC3 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ighv1-52A0A0A6YXC3 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC16.31■□□□□ 0.2
Ighv1-52A0A0A6YXC3 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ighv1-52A0A0A6YXC3 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC16.31■□□□□ 0.2
Ighv1-52A0A0A6YXC3 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ighv1-52A0A0A6YXC3 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ighv1-52A0A0A6YXC3 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ighv1-52A0A0A6YXC3 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Ighv1-52A0A0A6YXC3 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ighv1-52A0A0A6YXC3 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ighv1-52A0A0A6YXC3 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ighv1-52A0A0A6YXC3 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Ighv1-52A0A0A6YXC3 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC16.3■□□□□ 0.2
Ighv1-52A0A0A6YXC3 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ighv1-52A0A0A6YXC3 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ighv1-52A0A0A6YXC3 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC16.3■□□□□ 0.2
Ighv1-52A0A0A6YXC3 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ighv1-52A0A0A6YXC3 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ighv1-52A0A0A6YXC3 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Ighv1-52A0A0A6YXC3 Nsd1-206ENSMUST00000224918 1001 ntBASIC16.3■□□□□ 0.2
Ighv1-52A0A0A6YXC3 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ighv1-52A0A0A6YXC3 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC16.3■□□□□ 0.2
Ighv1-52A0A0A6YXC3 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ighv1-52A0A0A6YXC3 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ighv1-52A0A0A6YXC3 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ighv1-52A0A0A6YXC3 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ighv1-52A0A0A6YXC3 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ighv1-52A0A0A6YXC3 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ighv1-52A0A0A6YXC3 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Ighv1-52A0A0A6YXC3 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ighv1-52A0A0A6YXC3 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ighv1-52A0A0A6YXC3 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC16.29■□□□□ 0.2
Ighv1-52A0A0A6YXC3 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ighv1-52A0A0A6YXC3 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ighv1-52A0A0A6YXC3 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC16.28■□□□□ 0.2
Ighv1-52A0A0A6YXC3 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Ighv1-52A0A0A6YXC3 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC16.28■□□□□ 0.2
Ighv1-52A0A0A6YXC3 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
Ighv1-52A0A0A6YXC3 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ighv1-52A0A0A6YXC3 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC16.28■□□□□ 0.2
Ighv1-52A0A0A6YXC3 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Ighv1-52A0A0A6YXC3 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ighv1-52A0A0A6YXC3 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Ighv1-52A0A0A6YXC3 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ighv1-52A0A0A6YXC3 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Ighv1-52A0A0A6YXC3 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ighv1-52A0A0A6YXC3 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Ighv1-52A0A0A6YXC3 Gm17641-201ENSMUST00000166328 2350 ntBASIC16.27■□□□□ 0.2
Ighv1-52A0A0A6YXC3 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ighv1-52A0A0A6YXC3 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ighv1-52A0A0A6YXC3 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ighv1-52A0A0A6YXC3 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ighv1-52A0A0A6YXC3 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ighv1-52A0A0A6YXC3 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ighv1-52A0A0A6YXC3 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ighv1-52A0A0A6YXC3 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ighv1-52A0A0A6YXC3 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ighv1-52A0A0A6YXC3 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ighv1-52A0A0A6YXC3 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ighv1-52A0A0A6YXC3 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Ighv1-52A0A0A6YXC3 Gm43566-201ENSMUST00000196851 808 ntBASIC16.26■□□□□ 0.19
Ighv1-52A0A0A6YXC3 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC16.26■□□□□ 0.19
Ighv1-52A0A0A6YXC3 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC16.26■□□□□ 0.19
Ighv1-52A0A0A6YXC3 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ighv1-52A0A0A6YXC3 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC16.25■□□□□ 0.19
Ighv1-52A0A0A6YXC3 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ighv1-52A0A0A6YXC3 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Ighv1-52A0A0A6YXC3 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ighv1-52A0A0A6YXC3 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC16.24■□□□□ 0.19
Ighv1-52A0A0A6YXC3 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ighv1-52A0A0A6YXC3 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ighv1-52A0A0A6YXC3 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ighv1-52A0A0A6YXC3 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ighv1-52A0A0A6YXC3 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ighv1-52A0A0A6YXC3 AC115037.1-201ENSMUST00000223391 2173 ntBASIC16.23■□□□□ 0.19
Ighv1-52A0A0A6YXC3 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ighv1-52A0A0A6YXC3 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ighv1-52A0A0A6YXC3 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Ighv1-52A0A0A6YXC3 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ighv1-52A0A0A6YXC3 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ighv1-52A0A0A6YXC3 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Ighv1-52A0A0A6YXC3 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC16.22■□□□□ 0.19
Ighv1-52A0A0A6YXC3 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ighv1-52A0A0A6YXC3 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ighv1-52A0A0A6YXC3 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ighv1-52A0A0A6YXC3 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ighv1-52A0A0A6YXC3 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ighv1-52A0A0A6YXC3 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms