Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trbc1A0A0A6YWV4 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC19.69■□□□□ 0.74
Trbc1A0A0A6YWV4 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trbc1A0A0A6YWV4 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC19.69■□□□□ 0.74
Trbc1A0A0A6YWV4 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.69■□□□□ 0.74
Trbc1A0A0A6YWV4 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trbc1A0A0A6YWV4 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.69■□□□□ 0.74
Trbc1A0A0A6YWV4 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trbc1A0A0A6YWV4 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trbc1A0A0A6YWV4 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trbc1A0A0A6YWV4 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trbc1A0A0A6YWV4 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trbc1A0A0A6YWV4 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trbc1A0A0A6YWV4 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Trbc1A0A0A6YWV4 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trbc1A0A0A6YWV4 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Trbc1A0A0A6YWV4 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trbc1A0A0A6YWV4 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trbc1A0A0A6YWV4 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trbc1A0A0A6YWV4 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trbc1A0A0A6YWV4 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.66■□□□□ 0.74
Trbc1A0A0A6YWV4 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trbc1A0A0A6YWV4 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trbc1A0A0A6YWV4 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trbc1A0A0A6YWV4 AC117245.4-201ENSMUST00000217388 1646 ntBASIC19.65■□□□□ 0.74
Trbc1A0A0A6YWV4 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.65■□□□□ 0.74
Trbc1A0A0A6YWV4 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trbc1A0A0A6YWV4 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trbc1A0A0A6YWV4 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trbc1A0A0A6YWV4 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trbc1A0A0A6YWV4 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.65■□□□□ 0.74
Trbc1A0A0A6YWV4 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
Trbc1A0A0A6YWV4 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.64■□□□□ 0.73
Trbc1A0A0A6YWV4 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.64■□□□□ 0.73
Trbc1A0A0A6YWV4 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trbc1A0A0A6YWV4 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Trbc1A0A0A6YWV4 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trbc1A0A0A6YWV4 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trbc1A0A0A6YWV4 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trbc1A0A0A6YWV4 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.64■□□□□ 0.73
Trbc1A0A0A6YWV4 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trbc1A0A0A6YWV4 Notumos-201ENSMUST00000151998 2659 ntBASIC19.64■□□□□ 0.73
Trbc1A0A0A6YWV4 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Trbc1A0A0A6YWV4 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trbc1A0A0A6YWV4 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.63■□□□□ 0.73
Trbc1A0A0A6YWV4 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trbc1A0A0A6YWV4 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Trbc1A0A0A6YWV4 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.63■□□□□ 0.73
Trbc1A0A0A6YWV4 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trbc1A0A0A6YWV4 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
Trbc1A0A0A6YWV4 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trbc1A0A0A6YWV4 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trbc1A0A0A6YWV4 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.62■□□□□ 0.73
Trbc1A0A0A6YWV4 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trbc1A0A0A6YWV4 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trbc1A0A0A6YWV4 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trbc1A0A0A6YWV4 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trbc1A0A0A6YWV4 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trbc1A0A0A6YWV4 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Trbc1A0A0A6YWV4 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trbc1A0A0A6YWV4 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.61■□□□□ 0.73
Trbc1A0A0A6YWV4 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Trbc1A0A0A6YWV4 Gm45444-201ENSMUST00000211394 898 ntBASIC19.61■□□□□ 0.73
Trbc1A0A0A6YWV4 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trbc1A0A0A6YWV4 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trbc1A0A0A6YWV4 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trbc1A0A0A6YWV4 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trbc1A0A0A6YWV4 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.6■□□□□ 0.73
Trbc1A0A0A6YWV4 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trbc1A0A0A6YWV4 Gm22567-201ENSMUST00000175542 342 ntBASIC19.6■□□□□ 0.73
Trbc1A0A0A6YWV4 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Trbc1A0A0A6YWV4 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trbc1A0A0A6YWV4 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trbc1A0A0A6YWV4 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Trbc1A0A0A6YWV4 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trbc1A0A0A6YWV4 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.6■□□□□ 0.73
Trbc1A0A0A6YWV4 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.59■□□□□ 0.73
Trbc1A0A0A6YWV4 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Trbc1A0A0A6YWV4 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trbc1A0A0A6YWV4 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Trbc1A0A0A6YWV4 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trbc1A0A0A6YWV4 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trbc1A0A0A6YWV4 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.59■□□□□ 0.73
Trbc1A0A0A6YWV4 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
Trbc1A0A0A6YWV4 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
Trbc1A0A0A6YWV4 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trbc1A0A0A6YWV4 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.58■□□□□ 0.72
Trbc1A0A0A6YWV4 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Trbc1A0A0A6YWV4 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trbc1A0A0A6YWV4 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Trbc1A0A0A6YWV4 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trbc1A0A0A6YWV4 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trbc1A0A0A6YWV4 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Trbc1A0A0A6YWV4 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.57■□□□□ 0.72
Trbc1A0A0A6YWV4 Gm43566-201ENSMUST00000196851 808 ntBASIC19.57■□□□□ 0.72
Trbc1A0A0A6YWV4 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trbc1A0A0A6YWV4 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
Trbc1A0A0A6YWV4 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
Trbc1A0A0A6YWV4 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trbc1A0A0A6YWV4 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms