Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC14.72□□□□□ -0.05
Trav13-4-dv7A0A075B6C2 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Trav13-4-dv7A0A075B6C2 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav13-4-dv7A0A075B6C2 AC153524.1-201ENSMUST00000220436 1935 ntBASIC14.72□□□□□ -0.05
Trav13-4-dv7A0A075B6C2 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav13-4-dv7A0A075B6C2 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav13-4-dv7A0A075B6C2 Gm12818-201ENSMUST00000117562 1349 ntBASIC14.71□□□□□ -0.05
Trav13-4-dv7A0A075B6C2 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav13-4-dv7A0A075B6C2 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav13-4-dv7A0A075B6C2 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Trav13-4-dv7A0A075B6C2 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav13-4-dv7A0A075B6C2 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC14.71□□□□□ -0.06
Trav13-4-dv7A0A075B6C2 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav13-4-dv7A0A075B6C2 Gm7199-201ENSMUST00000118327 1485 ntBASIC14.7□□□□□ -0.06
Trav13-4-dv7A0A075B6C2 Gm9910-201ENSMUST00000195385 1550 ntBASIC14.7□□□□□ -0.06
Trav13-4-dv7A0A075B6C2 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav13-4-dv7A0A075B6C2 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav13-4-dv7A0A075B6C2 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav13-4-dv7A0A075B6C2 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Trav13-4-dv7A0A075B6C2 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav13-4-dv7A0A075B6C2 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC14.7□□□□□ -0.06
Trav13-4-dv7A0A075B6C2 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav13-4-dv7A0A075B6C2 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav13-4-dv7A0A075B6C2 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Trav13-4-dv7A0A075B6C2 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav13-4-dv7A0A075B6C2 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Trav13-4-dv7A0A075B6C2 Gm45364-201ENSMUST00000210883 159 ntBASIC14.69□□□□□ -0.06
Trav13-4-dv7A0A075B6C2 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC14.69□□□□□ -0.06
Trav13-4-dv7A0A075B6C2 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav13-4-dv7A0A075B6C2 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav13-4-dv7A0A075B6C2 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav13-4-dv7A0A075B6C2 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC14.68□□□□□ -0.06
Trav13-4-dv7A0A075B6C2 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Trav13-4-dv7A0A075B6C2 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav13-4-dv7A0A075B6C2 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav13-4-dv7A0A075B6C2 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav13-4-dv7A0A075B6C2 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav13-4-dv7A0A075B6C2 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav13-4-dv7A0A075B6C2 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Trav13-4-dv7A0A075B6C2 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav13-4-dv7A0A075B6C2 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
Trav13-4-dv7A0A075B6C2 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Trav13-4-dv7A0A075B6C2 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Trav13-4-dv7A0A075B6C2 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav13-4-dv7A0A075B6C2 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Trav13-4-dv7A0A075B6C2 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav13-4-dv7A0A075B6C2 AC154454.1-201ENSMUST00000225253 216 ntBASIC14.67□□□□□ -0.06
Trav13-4-dv7A0A075B6C2 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav13-4-dv7A0A075B6C2 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav13-4-dv7A0A075B6C2 Gm12504-201ENSMUST00000120860 2231 ntBASIC14.67□□□□□ -0.06
Trav13-4-dv7A0A075B6C2 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC14.67□□□□□ -0.06
Trav13-4-dv7A0A075B6C2 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav13-4-dv7A0A075B6C2 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav13-4-dv7A0A075B6C2 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Trav13-4-dv7A0A075B6C2 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav13-4-dv7A0A075B6C2 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Trav13-4-dv7A0A075B6C2 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav13-4-dv7A0A075B6C2 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav13-4-dv7A0A075B6C2 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Trav13-4-dv7A0A075B6C2 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav13-4-dv7A0A075B6C2 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC14.66□□□□□ -0.06
Trav13-4-dv7A0A075B6C2 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Trav13-4-dv7A0A075B6C2 Gm22567-201ENSMUST00000175542 342 ntBASIC14.66□□□□□ -0.06
Trav13-4-dv7A0A075B6C2 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC14.66□□□□□ -0.06
Trav13-4-dv7A0A075B6C2 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav13-4-dv7A0A075B6C2 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav13-4-dv7A0A075B6C2 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Trav13-4-dv7A0A075B6C2 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav13-4-dv7A0A075B6C2 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC14.65□□□□□ -0.06
Trav13-4-dv7A0A075B6C2 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav13-4-dv7A0A075B6C2 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav13-4-dv7A0A075B6C2 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav13-4-dv7A0A075B6C2 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Trav13-4-dv7A0A075B6C2 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC14.65□□□□□ -0.06
Trav13-4-dv7A0A075B6C2 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav13-4-dv7A0A075B6C2 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav13-4-dv7A0A075B6C2 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC14.64□□□□□ -0.07
Trav13-4-dv7A0A075B6C2 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav13-4-dv7A0A075B6C2 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav13-4-dv7A0A075B6C2 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav13-4-dv7A0A075B6C2 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav13-4-dv7A0A075B6C2 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav13-4-dv7A0A075B6C2 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav13-4-dv7A0A075B6C2 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav13-4-dv7A0A075B6C2 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav13-4-dv7A0A075B6C2 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav13-4-dv7A0A075B6C2 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav13-4-dv7A0A075B6C2 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav13-4-dv7A0A075B6C2 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav13-4-dv7A0A075B6C2 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav13-4-dv7A0A075B6C2 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC14.63□□□□□ -0.07
Trav13-4-dv7A0A075B6C2 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC14.63□□□□□ -0.07
Trav13-4-dv7A0A075B6C2 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav13-4-dv7A0A075B6C2 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Trav13-4-dv7A0A075B6C2 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav13-4-dv7A0A075B6C2 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav13-4-dv7A0A075B6C2 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav13-4-dv7A0A075B6C2 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav13-4-dv7A0A075B6C2 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Trav13-4-dv7A0A075B6C2 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms